Gene Psyc_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1783 
Symbol 
ID3515752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2196414 
End bp2197226 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content47% 
IMG OID637670480 
Productzinc metallopeptidase 
Protein accessionYP_265065 
Protein GI71066338 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TACTTACCAC AACTGTCATG GCAGCTTCAT TGTCGGCATT AACTTTAACA 
GGTTGTACTA GCACGACCAG TACGGGCGCC GTTGGCGTTG ATCGTCAGCA GCTGCTAATT
GTTTCAAGTG AACAGGTCTT GCAATTGTCA GCGCAGAGTT ATAATAAGAC AGTACAAGAG
GCAAGAGCGC GCGGTTTGTT AGATACCAAC ACAGCTCAGC TAAATCGCTT GAAGAATATC
TCTAACCGTT TGGTCGGTCA AGTTGGCGTC TATCGCCCTG ATGCGGCAAA ATGGCCATGG
GAAGTACATA CGATTAAATC TAACGACTTG AATGCTTTTG TACTTCCAGG TGGTAAAATC
ATGTTTTACA CAGGCATTAT CGATCGTCTG AATTTAACTG ATGATGAAAT CGCGGCGATT
ATGGGTCATG AGATGTCTCA TGCCTTACGT GAGCATTCAC GTGAGCGCCT ATCGCGTCAA
TATGCAACTC AAACTGGTAT CGGTGTCGCA GCCAGTATTT TTGGTCTATC ACAAGGACAA
GCTCAGCTTG CAAACGTTGC CGGAGACTTA GGTCTAAGCC GTCCGCATAG TCGCACCCAA
GAAGCTGAGG CGGATCAAAT TGGTCTTGAG CTAATGGCAC GTGCAGGCTA CAACCCACAA
GCCGCGATTA CCTTGTGGCA AAAAATGCAG CGCGCCAGCC AAGGCGAGCC ACCACAATTC
TTAAGCACTC ACCCATCTAG TAGCAATCGT ATCGCTGAGT TGCAGTCATT GATGCCAAAA
GTAATGCCGC TCTATCAAAG AGCACGTCGT TAA
 
Protein sequence
MKKLLTTTVM AASLSALTLT GCTSTTSTGA VGVDRQQLLI VSSEQVLQLS AQSYNKTVQE 
ARARGLLDTN TAQLNRLKNI SNRLVGQVGV YRPDAAKWPW EVHTIKSNDL NAFVLPGGKI
MFYTGIIDRL NLTDDEIAAI MGHEMSHALR EHSRERLSRQ YATQTGIGVA ASIFGLSQGQ
AQLANVAGDL GLSRPHSRTQ EAEADQIGLE LMARAGYNPQ AAITLWQKMQ RASQGEPPQF
LSTHPSSSNR IAELQSLMPK VMPLYQRARR