Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1758 |
Symbol | mviN |
ID | 3515726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 2165674 |
End bp | 2167224 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637670454 |
Product | MviN family virulence factor |
Protein accession | YP_265040 |
Protein GI | 71066313 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.155059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAA GTCGGTTATT TCGTTCAACC ATGGTGGTCA GTAGTATGAC CATGCTGTCG CGTATTTTAG GTCTGGTACG CGATATTGTA TTATTAGGCG TCTTTGGCGC TGGTGGTCTC ATGGACGCCT TTTTAGTCGC CTTTAAGATA CCAAATTTTC TGCGACGTCT GTTTGCTGAA GGCGCGTTTA GTCAGGCTTT TGTACCTATT TTATCCGAAT ATAAAGAAAA GTATAGCTTA CGAGAGGTAC AGATATTAGT CAGTCGCACC TCAGGTGCTC TGCTGTTAAT TTTATCGATG CTCACCGTGG TGGTTATCTT AATGGCACCG TGGGTCGTGA CTTTATTTGC ACCTGGTTTT GCCGATCAAC CTAATAAGTT TGCGATTACC GCTGAGCTGT TGCGACTGAC CTTTCCTTAC TTATTATTTA TCTCAATGAC TGCCTTTGCC AGCGGCATCT TACAAAGCTA TGGACGTTTT GCAGCACCTG CTTTTGCACC GGTATTGCTC AATCTATCTA TGATTGGTGG CGCACTGGTT TTTGCACCCA TGTTCGAGAC GCCCATTATG GCGCTCGGTT ATGCGGTTGC TATTGCAGGC TTATTACAGC TCCTACTGCA GTTGCCACAA TTGTCGCAAC AAAAATTACT GGTCATGCCC AAAATCGACT TCCAGCATGA AGGCGTCAGG CGCATACTAA AATTAATGCT ACCTGCTATC TTTGGAGTAT CGGTTACTCA GATTAATCTG TTATTAAACA CTATCTTTGC CTCTTTGATG ATTGGCGGTT CAGTCTCATG GCTATACGCC GCTGAGCGTA TGAGCGAGCT ACCACTTGGT TTAATTGGCG TGGCAATTGG TACAGTCATT TTGCCAAGCC TATCAAAAAG TGAAGCCCAA AAAGACGATG TCAGTTTTAA AAAGACTCTC GATTGGGCAG CCCGTTTAAT TATATTAGTC GGCGTACCTG CATCGGCAGC ACTATTTATA CTTTCTGATG TACTGATGCA AGCGCTGTTC TTACGCGGCG AATTTACCTT ACGTGATGCG CAAATGAGTT CGCTTGCGCT AAAAAGTATG GCAGGTGGCA TCTTGGGCTT TATGTTGATT AAAGTCTTTG CCCCTGCTTT CTTCGCTCGT CAAGATATCC GCACACCCGT CAAAATCGGT ATTATTTCCG TTTTTGCTAA TATGATTTTT AGTGTCATCT TTATTGGGAT ATTTTACTTT CTTGAGATTC CACTACATGG CGGGCTCGCA CTTGCGACGA CTGGCGCATC ATTTGTGAAT GCAGGCTTAT TATATTATTT CTTGCATAAG CGTGATATTT TCCGTTTTGG CAGTCACTGG AAAAAGCTGT TTGCGCAGTT TGCGATCTCT ACCAGTGCCA TGGTCGCTGT GCTTTATATC ATGCTACCGT ACTTTCCAAC CGATAAGGCA CAGTGGCAAC GTTTGATTGC GCTACTGATT ATGTGTACGG TCGGTGCGCT GGTTTACGGC GGAGTATTAT TGGCAACAGG CTTCCGTCCT CGCCATCTGA AACATGGTTA A
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Protein sequence | MAKSRLFRST MVVSSMTMLS RILGLVRDIV LLGVFGAGGL MDAFLVAFKI PNFLRRLFAE GAFSQAFVPI LSEYKEKYSL REVQILVSRT SGALLLILSM LTVVVILMAP WVVTLFAPGF ADQPNKFAIT AELLRLTFPY LLFISMTAFA SGILQSYGRF AAPAFAPVLL NLSMIGGALV FAPMFETPIM ALGYAVAIAG LLQLLLQLPQ LSQQKLLVMP KIDFQHEGVR RILKLMLPAI FGVSVTQINL LLNTIFASLM IGGSVSWLYA AERMSELPLG LIGVAIGTVI LPSLSKSEAQ KDDVSFKKTL DWAARLIILV GVPASAALFI LSDVLMQALF LRGEFTLRDA QMSSLALKSM AGGILGFMLI KVFAPAFFAR QDIRTPVKIG IISVFANMIF SVIFIGIFYF LEIPLHGGLA LATTGASFVN AGLLYYFLHK RDIFRFGSHW KKLFAQFAIS TSAMVAVLYI MLPYFPTDKA QWQRLIALLI MCTVGALVYG GVLLATGFRP RHLKHG
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