Gene Psyc_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1758 
SymbolmviN 
ID3515726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2165674 
End bp2167224 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content45% 
IMG OID637670454 
ProductMviN family virulence factor 
Protein accessionYP_265040 
Protein GI71066313 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.155059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA GTCGGTTATT TCGTTCAACC ATGGTGGTCA GTAGTATGAC CATGCTGTCG 
CGTATTTTAG GTCTGGTACG CGATATTGTA TTATTAGGCG TCTTTGGCGC TGGTGGTCTC
ATGGACGCCT TTTTAGTCGC CTTTAAGATA CCAAATTTTC TGCGACGTCT GTTTGCTGAA
GGCGCGTTTA GTCAGGCTTT TGTACCTATT TTATCCGAAT ATAAAGAAAA GTATAGCTTA
CGAGAGGTAC AGATATTAGT CAGTCGCACC TCAGGTGCTC TGCTGTTAAT TTTATCGATG
CTCACCGTGG TGGTTATCTT AATGGCACCG TGGGTCGTGA CTTTATTTGC ACCTGGTTTT
GCCGATCAAC CTAATAAGTT TGCGATTACC GCTGAGCTGT TGCGACTGAC CTTTCCTTAC
TTATTATTTA TCTCAATGAC TGCCTTTGCC AGCGGCATCT TACAAAGCTA TGGACGTTTT
GCAGCACCTG CTTTTGCACC GGTATTGCTC AATCTATCTA TGATTGGTGG CGCACTGGTT
TTTGCACCCA TGTTCGAGAC GCCCATTATG GCGCTCGGTT ATGCGGTTGC TATTGCAGGC
TTATTACAGC TCCTACTGCA GTTGCCACAA TTGTCGCAAC AAAAATTACT GGTCATGCCC
AAAATCGACT TCCAGCATGA AGGCGTCAGG CGCATACTAA AATTAATGCT ACCTGCTATC
TTTGGAGTAT CGGTTACTCA GATTAATCTG TTATTAAACA CTATCTTTGC CTCTTTGATG
ATTGGCGGTT CAGTCTCATG GCTATACGCC GCTGAGCGTA TGAGCGAGCT ACCACTTGGT
TTAATTGGCG TGGCAATTGG TACAGTCATT TTGCCAAGCC TATCAAAAAG TGAAGCCCAA
AAAGACGATG TCAGTTTTAA AAAGACTCTC GATTGGGCAG CCCGTTTAAT TATATTAGTC
GGCGTACCTG CATCGGCAGC ACTATTTATA CTTTCTGATG TACTGATGCA AGCGCTGTTC
TTACGCGGCG AATTTACCTT ACGTGATGCG CAAATGAGTT CGCTTGCGCT AAAAAGTATG
GCAGGTGGCA TCTTGGGCTT TATGTTGATT AAAGTCTTTG CCCCTGCTTT CTTCGCTCGT
CAAGATATCC GCACACCCGT CAAAATCGGT ATTATTTCCG TTTTTGCTAA TATGATTTTT
AGTGTCATCT TTATTGGGAT ATTTTACTTT CTTGAGATTC CACTACATGG CGGGCTCGCA
CTTGCGACGA CTGGCGCATC ATTTGTGAAT GCAGGCTTAT TATATTATTT CTTGCATAAG
CGTGATATTT TCCGTTTTGG CAGTCACTGG AAAAAGCTGT TTGCGCAGTT TGCGATCTCT
ACCAGTGCCA TGGTCGCTGT GCTTTATATC ATGCTACCGT ACTTTCCAAC CGATAAGGCA
CAGTGGCAAC GTTTGATTGC GCTACTGATT ATGTGTACGG TCGGTGCGCT GGTTTACGGC
GGAGTATTAT TGGCAACAGG CTTCCGTCCT CGCCATCTGA AACATGGTTA A
 
Protein sequence
MAKSRLFRST MVVSSMTMLS RILGLVRDIV LLGVFGAGGL MDAFLVAFKI PNFLRRLFAE 
GAFSQAFVPI LSEYKEKYSL REVQILVSRT SGALLLILSM LTVVVILMAP WVVTLFAPGF
ADQPNKFAIT AELLRLTFPY LLFISMTAFA SGILQSYGRF AAPAFAPVLL NLSMIGGALV
FAPMFETPIM ALGYAVAIAG LLQLLLQLPQ LSQQKLLVMP KIDFQHEGVR RILKLMLPAI
FGVSVTQINL LLNTIFASLM IGGSVSWLYA AERMSELPLG LIGVAIGTVI LPSLSKSEAQ
KDDVSFKKTL DWAARLIILV GVPASAALFI LSDVLMQALF LRGEFTLRDA QMSSLALKSM
AGGILGFMLI KVFAPAFFAR QDIRTPVKIG IISVFANMIF SVIFIGIFYF LEIPLHGGLA
LATTGASFVN AGLLYYFLHK RDIFRFGSHW KKLFAQFAIS TSAMVAVLYI MLPYFPTDKA
QWQRLIALLI MCTVGALVYG GVLLATGFRP RHLKHG