Gene Psyc_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1748 
Symbol 
ID3515716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2153610 
End bp2154491 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content43% 
IMG OID637670444 
ProductIS4 family transposase 
Protein accessionYP_265030 
Protein GI71066303 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.7477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATAG ACGAATTTAT CATCAATATC TATTTAATGG TAGAGCAATA TTACAAAATA 
GTCGTTACTG AACCCTTGCG AGGTGCAGGT TACGCGCCAA AGCTGAGTGA TCCTGAGATC
ATTTGCATGG AACTGGTCGG TGAATTTTTA AACCTTGATC AAGACAAACA GATTTGGCAA
TATTTTACCC AGCACTGGCA AGCCTGGTTT CCAGCCATAG GCTCATATCC TAACTTCGCA
AAGCATTGCG CGAATCTGTG GCAAGTCAAA CAGCGGATAC AAGATAACGT CAGTCAACTT
GAGGGCCGTG ACAACATCCA TTTTATGGAT GGTTTTCCGA TACCCGTCTG TCATTATGGA
CGCGCTTATC GGCATAAAAA CTATCAAGAC TTAGCGGCTT TTAGCTACTG TGCGGCTAAG
CAAGAGAGGT ACTATGGCTT TGAAGGACAT TTGCTTGTTA ACTTATCGGG CATGATTAAA
GGCTTTACCT TTGCTCCTGC CAATGTTGAT GAAAGAGCGG TTGCGCCTGA TATTACTGAC
AATATCTATG GTTTGCTCGG CGCTGATAAA GGGTATATCA GCCCTAGTCT CACTCAGTAC
TACGACGCTC AAGGAGTGGA TTTACAAACG CCACTCAGAG CTAACATGAA AGAGGATAGA
CCCAAACCTG TGGTAAAACG GCTAATGAAA GCCCGCCGTA TCGTTGAAAC AGTCATTGGT
CAGCTATCAG AACGATTTAA TATACAAAGG GTACGAGCAA GAGATTTATG GCATTTGTCT
CATCGATTGA TTCGTAAAAT TCTGTCACAT AATCTATGCT TTGTACTCAA CAAAAAACTT
GGTAACCCGC CACTTCAGTT TGAATTGCTT ATTTCAAGTT GA
 
Protein sequence
MPIDEFIINI YLMVEQYYKI VVTEPLRGAG YAPKLSDPEI ICMELVGEFL NLDQDKQIWQ 
YFTQHWQAWF PAIGSYPNFA KHCANLWQVK QRIQDNVSQL EGRDNIHFMD GFPIPVCHYG
RAYRHKNYQD LAAFSYCAAK QERYYGFEGH LLVNLSGMIK GFTFAPANVD ERAVAPDITD
NIYGLLGADK GYISPSLTQY YDAQGVDLQT PLRANMKEDR PKPVVKRLMK ARRIVETVIG
QLSERFNIQR VRARDLWHLS HRLIRKILSH NLCFVLNKKL GNPPLQFELL ISS