Gene Psyc_1739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1739 
SymbolftsJ 
ID3515707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2143595 
End bp2144227 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content44% 
IMG OID637670435 
Product23S rRNA methylase, heat shock protein 
Protein accessionYP_265021 
Protein GI71066294 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0293] 23S rRNA methylase 
TIGRFAM ID[TIGR00438] cell division protein FtsJ 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.230515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCACAC GTATTGAAAA CAAAAAGTTG TCAAAAAGCA GTAGTGCTTG GATGAAAGAG 
CATATTGATG ATCATTATGT GCAAAAGGCC CAAAAAGATG GCTACCGTGC CCGCGCTGCC
TATAAATTAT TAGAAATAAA TGAAAAAACC AATCTGATAA AAAAAGGCAT GACAGTCGTC
GATTTGGGCA GTGCCCCTGG CAGCTGGTCT CAAGTCGCTG GTCAGCTGGT CGGTGAAAAA
GGTATTTTGA TTGCCTCTGA TATTTTGCCA ATGGATACCT TGCCAGACGT TACTTTTATT
CAAGGTGACT TTCGCGAGCC AGAAGTTTTT GACCATATAA TGGCTGAGGT TGGTGATAGA
CAAGTCGATG TGGTGCTGTC TGATATGGCG CCCAATACGG CGGGTAATAG TGCTATTGAC
CAGCCGCGTA TGATGTACTT ATGTGAGCTT GCAGTCGATT TCGCGTTGGC AACCTTACCA
GAAGGTGGCG CGCTTATTAT GAAAGTGTTT CAAGGCGAGG GTACACAAGA ATTACGCAAG
CAGATGCAGG CGGATTTTAG TAAAATCCGT AGTATTAAGC CTGGCGCTTC TAGACCGCGC
TCAAAAGAGA TGTTTTGGAT TGCGATTAAG TAA
 
Protein sequence
MATRIENKKL SKSSSAWMKE HIDDHYVQKA QKDGYRARAA YKLLEINEKT NLIKKGMTVV 
DLGSAPGSWS QVAGQLVGEK GILIASDILP MDTLPDVTFI QGDFREPEVF DHIMAEVGDR
QVDVVLSDMA PNTAGNSAID QPRMMYLCEL AVDFALATLP EGGALIMKVF QGEGTQELRK
QMQADFSKIR SIKPGASRPR SKEMFWIAIK