Gene Psyc_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1729 
Symbol 
ID3515697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2130976 
End bp2132862 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content45% 
IMG OID637670425 
Productglutathione-regulated K+ efflux antiporter 
Protein accessionYP_265011 
Protein GI71066284 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.282335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.367731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCTG CCGCCGCCGG CTCACCAAAT TTGATGTTAC AAGCGACAAT TTTCTTGGGA 
GCAGCCCTGC TCTTTGTACC CCTTGGTAAA CGTTTTGGTA TTGCGACGGT TTTAGGTTAT
CTCATCACAG GATTGATACT GGGTCCAAGT GTGCTGGACG TGGCAGGCGA TGCTGAGAGC
TTATTGCATT TTTCTGAGTT TGGCGTGGTG ATGCTGCTAT TCATTATCGG GCTTGAGCTG
CAGCCATCAA GGCTCTGGGC ACTCAGGCGC TCAATATTCG TCCTTGGCGG TTTGCAAGTT
GGTCTGACTG GTGTCTTATT GATGGGGCTG TTACATCAGA TTTTTGGCTT GCAGCTCGAT
ACCGCTTTTA TCGTTGGCTT CGGTCTTGCG CTCTCATCCA CTGCCTTTGT TCTGCAAATC
CTGACTGAAA AACAGCAGCT GTCGAGCACT CATGGCCGCG AAGCCTTTAC GATTTTATTA
TTCCAAGACA TTGCGGTTAT CCCTTTATTA GCGGTCATTC CATTTTTATC AGGGGTGCGT
GAACAAAGCT ATGATTTGAT TTATTTTGGT AAAGTTTTTG CGGTTTTTGC TGGGCTTATT
TTTGCCAGTC GCTATGTCGT TCGTCCATTT TTTAAATTTG TCGCCTCAAG TGGCGCGTCC
GAATTACTAA CGGCAGTGGC GCTATTTATC GTGATGGGCG TGTCGATTTT GATGGGTCAA
ATCGGTCTTT CAATGGCGTT GGGTGCATTT TTAACCGGCG TATTGTTGGC GGATTCTGAA
TATCGCCATG AGCTTGAAGC CAGTATTGAG CCTTTTAAAG GGCTACTTTT AGGTCTGTTT
TTTATGTCGG TCGGTATGCT GACCGATGTG AATTTGATAT TAGCAAAGCC CATCTTTATC
ATCGGCTGTG CGATGGCATT GATGTTTATC AAGTTCGGGG TAATTACAGC GATTGCAAAA
CTCTTTGGTA ATCGTTGGCC GACCAGTATC AGGTTGGGAG TGACACTGGC CCAAGGTGGT
GAGTTTGCTT TTGTCTTGTT CAGTGTGGCA AGCGCCCAAA ATGTCTTACA ACCTGAACTT
GCCAATACGC TAAACCTGAT CGTCACCATC TCTATGGCAC TCACTCCTTT GGCGTTCTTA
TTGTTAGAAA AAGTCGGCGA GCCATTATTT GCCAAAAGCA AACCAAGTCG CGAATACGAT
ACGATTCCAG ACCACGAGCA TCAGGTGATT ATTGCTGGCT TTGGGCGAGT CGGTCAGATT
ATCGGTCGTG TGCTACGTAT GCATAATATT GAGTTTACCG CGATTGAACG CTCAGCAAAC
CGCGTTGACT TTGTCCGTAA ATTCGGTAAC CAAGTCTATT ATGGTGATCC AAAAAACCCT
GAAATCCTAC GTGCAGCAGG TATCAAAAAA GCACGGATCT TTATCCTTGC CATCGATGAT
TTAGAACGCT CTATCACCAC GGCTCAGTAT TTACGTAAAA ACTATCCAGA TTTGATTATC
TTGGCACGGG CACGTGATCG TCAGCATTAC TACCGATTAC GTGAGGTTGG GGTTCGTCAC
ATTTGGCGTG AGACCTATTT GTCATCGCTA GATATGTCGC GGGAATCGTT ACAACTGCTC
GGTATCTCAG CAGAAAAAGC ACGTGAAACG GTACAAACCT TCCGTGATTA CGATGATGAT
TTGATTGAAC GCCAACAAGC CATTTATGAT GATGAGGCCA GTATGATTGA ATCGGCTCAA
TCAGCAATGG CAGAGCTTGA AAGCTTATTT GATGAAGATA TTGGCAAAGC TCGTAAAATG
GACTTGAGCG ATTTTTATGA AGTGCTAAAA AGTCAAGCCA TACCAGTCGA TGATGAAAAT
AATAGTACGA CTGAGTCTAA ACATTAA
 
Protein sequence
MFAAAAGSPN LMLQATIFLG AALLFVPLGK RFGIATVLGY LITGLILGPS VLDVAGDAES 
LLHFSEFGVV MLLFIIGLEL QPSRLWALRR SIFVLGGLQV GLTGVLLMGL LHQIFGLQLD
TAFIVGFGLA LSSTAFVLQI LTEKQQLSST HGREAFTILL FQDIAVIPLL AVIPFLSGVR
EQSYDLIYFG KVFAVFAGLI FASRYVVRPF FKFVASSGAS ELLTAVALFI VMGVSILMGQ
IGLSMALGAF LTGVLLADSE YRHELEASIE PFKGLLLGLF FMSVGMLTDV NLILAKPIFI
IGCAMALMFI KFGVITAIAK LFGNRWPTSI RLGVTLAQGG EFAFVLFSVA SAQNVLQPEL
ANTLNLIVTI SMALTPLAFL LLEKVGEPLF AKSKPSREYD TIPDHEHQVI IAGFGRVGQI
IGRVLRMHNI EFTAIERSAN RVDFVRKFGN QVYYGDPKNP EILRAAGIKK ARIFILAIDD
LERSITTAQY LRKNYPDLII LARARDRQHY YRLREVGVRH IWRETYLSSL DMSRESLQLL
GISAEKARET VQTFRDYDDD LIERQQAIYD DEASMIESAQ SAMAELESLF DEDIGKARKM
DLSDFYEVLK SQAIPVDDEN NSTTESKH