Gene Psyc_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1685 
SymboluvrA 
ID3515653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2085665 
End bp2088571 
Gene Length2907 bp 
Protein Length968 aa 
Translation table11 
GC content47% 
IMG OID637670381 
Productexcinuclease ABC subunit A 
Protein accessionYP_264967 
Protein GI71066240 
COG category[L] Replication, recombination and repair 
COG ID[COG0178] Excinuclease ATPase subunit 
TIGRFAM ID[TIGR00630] excinuclease ABC, A subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACG AGTATATTAA GGTTCGCGGC GCACGCACTC ATAATCTAAA AAATATCGAT 
TTAGACATTC CACGAGATAA ATTCGTGGTC ATTACTGGTT TATCAGGTTC TGGTAAATCG
TCATTGGCAT TCGATACCCT TTATGCTGAA GGCCAACGTC GTTATGTCGA GAGCTTATCG
GCGTATGCGC GTCAGTTCCT CTCGCAGATG GAGAAGCCGG ACGTCGATAG TATCGAGGGC
TTATCACCAG CGATTGCTAT CGAGCAAAAA TCGACCAACC ATAACCCACG CTCAACGGTC
GGTACGATTA CCGAGATTTA TGACTACTTG CGCCTGCTCT ATGCGCGTAT CGGCACGCCT
TATTGCCCAG AGCATGGCGA GCCAATGGTC GCACAGTCGG TGACTGAAAT GGTCGATCAA
GTCATGGCGT TGCCCGATGA TACGAAGATT ATGATTCTTG CGCCCGTGAT TCGTGAACGT
AAAGGCGAGC ATACCGTCTT ACTTGAGCAG TTGATTGGTC AAGGCTTTGT ACGCGTGCGC
GTCGATGGTG ATGTCTACGA TACCGACGAG CTACCGACAC TCGATAAGAA GAAAAAACAT
ACCATTGAAG TCGTGGTTGA TCGCTTTAAA GTCCGTGATG ACTTGGGTAA TCGTGTCGCT
GAAAGCTTGG AGACAGCACT GCGCTTGGGT CAAGGGCTGG TCACGCTACA TTTTATGGAT
GGCAACCCAA AAGAAGGCGG TGATGAAAAC CAAGTGATGT CAGCCAAGCA CTCTTGTCCT
GTTTGTGATC GCGCAGTGTC TGAGCTTGAG CCGCGCATGT TCAGTTTTAA CAACCCGTAC
GGTGCTTGCC CAAGTTGTGA TGGTCTCGGT AAACGTCAGT ATTTTTCTGC TGAAAAGCTG
ATCACCCATC ATGAAAAATC GCTCAATCAA GGTGCGATTA ATGGTTGGGA TAAGCGTCAT
GCCTATTACT TTGGTCTGCT CTCTACCGTC TGCAATCATT TTAAAATCGA TATGGATGCA
CCGTGGCAAG AGCTGCCAAA AGCGCAGCAA GATATCATCA TGCAGGGTTC TGGTAAAGAA
AAGCTCACCT TTAACTTTAC TGATGAGCGC GGTCGAAAAA CCAATACAAC CGTACCATTT
GAAGGTGTAC TGCCTTATTT AGAGCGCCGT TATGCCAAAA CCCAAAGCAA CCTAGTCCGT
GACGAGTTAG CTAAATACTT GGCTGATACT ACTTGTAACG TCTGCGATGG TGCACGTTTG
AATGAGATCT CACGCAATGT CCGCGTTGAC GATCAAACGA TTGCTGAAAT TGTCAAACTA
TCTATCGGTG ATGCCGCTGA ATATTATAAA ACAATAAAAA TTGGTGGTCA TAAAGGCGAA
GTTGCAGAAA AAATCTTTAA AGAGATTAAT GAGCGTCTAA ACTTCCTCGT CAGTGTCGGA
CTTGATTACC TGTCGCTTGC GCGCTCTGCT GAAACGCTAT CAGGCGGTGA AGCGCAACGT
ATTCGTCTTG CCAGCCAAAT TGGTGCAGGT CTGATGGGTG TGATGTATGT ACTCGATGAG
CCATCCATCG GTCTACATCA GCGCGATAAT GATCGCTTGC TAAAAACCTT AACGCGCTTG
CGTGATTTGG GTAATACCGT ACTGGTCGTT GAGCACGATG AAGATGCCAT TCGCCAAGCG
GATCATGTCA TCGATATCGG TGTCGGCGCC GGCATACATG GCGGTCACAT TATTGCCCAA
GGCACAGTCG ATGACATCAT GGCGAATAAA GAATCGCTGA CTGGACAATA TATGTCTGGT
AAGAGGAAAA TCGAGATTCC AGCCATTCGT CATAAAGCCA AAACTATCGA TATGGAAGTC
AAAGGTAAAG CTAAGCCCAA ACAAGTTCCG ATGACTATTG AGCTCAAAGG CGCATCAGGC
AACAACTTAC ACGACGTTGA CTTGACCTTG CCAATAGGCA TAATGACTTG TATTACTGGG
GTATCGGGTT CAGGTAAATC AACCTTGATT AACCGTACCT TAATGCCATT GGCAGCGACG
CAGTTAAATA ATGCCTCAAC GCTCATCGCG GATAAGCATG ACAGCATCAG CGGTCTTGAG
CATTTGGACA AAATGGTCGA TATCGATCAA AGCCCCATTG GTCGTACGCC GCGCTCAAAT
CCAGCGACGT ATACTGGCGT GTTTACGCCT GTTCGTGAAA TGTTTGCACA AACGCAAGAA
GCGCGTGCTC GTGGTTATAA AGCTGGTCGC TTTAGCTTCA ACGTCAAAGG CGGACGCTGC
GAGATGTGTC AAGGTGATGG TCTTATCAAG GTCGAGATGC ACTTTTTGCC CGACATGTAT
GTGCCGTGTG ATACTTGTGA AGGCAAGCGC TATAATCGCG AGACTTTAGA GATTCACTAT
AAAGGTAAAA ACATCGCCGA CGTCCTAGAT ATGACCGTTG AAGATGCCAC TGAGTTTTTC
TCTGCCATTC CAGCGATTTA CCGTCGTTTG CAAGCATTAA TGGATGTCGG TTTAAGCTAT
ATCCGCTTGG GTCAGTCTGC ACCGACGTTA TCAGGTGGTG AAGCGCAGCG GGTTAAATTA
GCACGTGAGC TGGCGAAGCG TGATACCGGA CAGACGCTGT ATATCTTGGA TGAGCCAACT
ACTGGTTTGC ATTTCCATGA TATCGATAAG CTACTCCATA TCCTGCATGC GCTACGCGAT
AAAGGGAATA CCATCGTGGT CATTGAGCAC AATCTTGACG TAATTAAAAC TGCGGATTGG
GTGATTGATT TGGGTCCTGA AGGTGGTAAA GGTGGTGGAC TGATTATCGC GGAAGGTACG
CCTGAGGAAG TGGCAGAAGT CAAAGGCTCG TATACTGGTG AGTTCTTGAA GCCGATGCTT
AAGCAAGCGA TGAAAGAAGT GAGCTAA
 
Protein sequence
MAHEYIKVRG ARTHNLKNID LDIPRDKFVV ITGLSGSGKS SLAFDTLYAE GQRRYVESLS 
AYARQFLSQM EKPDVDSIEG LSPAIAIEQK STNHNPRSTV GTITEIYDYL RLLYARIGTP
YCPEHGEPMV AQSVTEMVDQ VMALPDDTKI MILAPVIRER KGEHTVLLEQ LIGQGFVRVR
VDGDVYDTDE LPTLDKKKKH TIEVVVDRFK VRDDLGNRVA ESLETALRLG QGLVTLHFMD
GNPKEGGDEN QVMSAKHSCP VCDRAVSELE PRMFSFNNPY GACPSCDGLG KRQYFSAEKL
ITHHEKSLNQ GAINGWDKRH AYYFGLLSTV CNHFKIDMDA PWQELPKAQQ DIIMQGSGKE
KLTFNFTDER GRKTNTTVPF EGVLPYLERR YAKTQSNLVR DELAKYLADT TCNVCDGARL
NEISRNVRVD DQTIAEIVKL SIGDAAEYYK TIKIGGHKGE VAEKIFKEIN ERLNFLVSVG
LDYLSLARSA ETLSGGEAQR IRLASQIGAG LMGVMYVLDE PSIGLHQRDN DRLLKTLTRL
RDLGNTVLVV EHDEDAIRQA DHVIDIGVGA GIHGGHIIAQ GTVDDIMANK ESLTGQYMSG
KRKIEIPAIR HKAKTIDMEV KGKAKPKQVP MTIELKGASG NNLHDVDLTL PIGIMTCITG
VSGSGKSTLI NRTLMPLAAT QLNNASTLIA DKHDSISGLE HLDKMVDIDQ SPIGRTPRSN
PATYTGVFTP VREMFAQTQE ARARGYKAGR FSFNVKGGRC EMCQGDGLIK VEMHFLPDMY
VPCDTCEGKR YNRETLEIHY KGKNIADVLD MTVEDATEFF SAIPAIYRRL QALMDVGLSY
IRLGQSAPTL SGGEAQRVKL ARELAKRDTG QTLYILDEPT TGLHFHDIDK LLHILHALRD
KGNTIVVIEH NLDVIKTADW VIDLGPEGGK GGGLIIAEGT PEEVAEVKGS YTGEFLKPML
KQAMKEVS