Gene Psyc_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1672 
Symbol 
ID3515640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2069380 
End bp2070246 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content45% 
IMG OID637670368 
ProductLysR family transcriptional regulator 
Protein accessionYP_264954 
Protein GI71066227 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.255647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGGG ATGGTATCAG TGAGTTTGTC TACGTAGCAG AACTTGAGAG TTTTACTAAA 
GCGGCGGCAA AGCTTGCAAT TTCGACGGCA CAAGTTAGCC GACAGGTCAC TGCATTGGAG
GAACGGCTCA ATACCAAGCT GCTATACCGA ACCACGCGTA AAGTATCATT GACAGAAGAA
GGCCGCGTGT TTTATCAGCA TTGCCGCAGC ATCCTTGATG GATTAGATGC CGCAGAGCAA
GCGGTCAGTA ATTTGCAGTC CAAACCGCAA GGTCGAATCA ATCTCACAGC TCCTGTGACC
TATGGAGAGC AGCAGCTATT GCCACTGGTG AATGATTTTA TGGTGCAATA TAGTGATATC
GAAGTGACGG CTTTTTTGAG CAATCAAAAG ATTGATTTGA TTGAAGGTGG TTATGACTTG
GCAATACGTA TCGGCAAGCT GAGCGACTCT ACAATGATGG CAAAAAAACT CAGCCACCGT
ACCAATTTCG TCTGTGCAGC GCCCACTTAT TTTAAGAAAT ATGGCCGCCC AAAAACCTTG
GATGAACTCA GTCAATACAG CTGCTTACTG GGTACATTGG ATTATTGGCA TTTTAAAGAA
GAAGATACGG AGCGCAATAT ACGCGTGAGC GGCAAGATAC GTTATAACAG TGGTTATAGC
TTAGTCGATG CGGCGCTAAA GGGGCTTGGT ATCGTACAAC TGCCGGATTA CTATGTGCAA
AAACACCTCG TAACAGGACG TCTGATGACA GTATTGGATG AATATAGAGA GCAAGAAGAA
GGGATTTGGG CCATCTACCC GCACAATCGT CATTTATCAC CAAAAATCAG ACTATTGGTA
GACTATCTGG CAGAGCATTT GGCGTAA
 
Protein sequence
MKWDGISEFV YVAELESFTK AAAKLAISTA QVSRQVTALE ERLNTKLLYR TTRKVSLTEE 
GRVFYQHCRS ILDGLDAAEQ AVSNLQSKPQ GRINLTAPVT YGEQQLLPLV NDFMVQYSDI
EVTAFLSNQK IDLIEGGYDL AIRIGKLSDS TMMAKKLSHR TNFVCAAPTY FKKYGRPKTL
DELSQYSCLL GTLDYWHFKE EDTERNIRVS GKIRYNSGYS LVDAALKGLG IVQLPDYYVQ
KHLVTGRLMT VLDEYREQEE GIWAIYPHNR HLSPKIRLLV DYLAEHLA