Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1672 |
Symbol | |
ID | 3515640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 2069380 |
End bp | 2070246 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637670368 |
Product | LysR family transcriptional regulator |
Protein accession | YP_264954 |
Protein GI | 71066227 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.255647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTGGG ATGGTATCAG TGAGTTTGTC TACGTAGCAG AACTTGAGAG TTTTACTAAA GCGGCGGCAA AGCTTGCAAT TTCGACGGCA CAAGTTAGCC GACAGGTCAC TGCATTGGAG GAACGGCTCA ATACCAAGCT GCTATACCGA ACCACGCGTA AAGTATCATT GACAGAAGAA GGCCGCGTGT TTTATCAGCA TTGCCGCAGC ATCCTTGATG GATTAGATGC CGCAGAGCAA GCGGTCAGTA ATTTGCAGTC CAAACCGCAA GGTCGAATCA ATCTCACAGC TCCTGTGACC TATGGAGAGC AGCAGCTATT GCCACTGGTG AATGATTTTA TGGTGCAATA TAGTGATATC GAAGTGACGG CTTTTTTGAG CAATCAAAAG ATTGATTTGA TTGAAGGTGG TTATGACTTG GCAATACGTA TCGGCAAGCT GAGCGACTCT ACAATGATGG CAAAAAAACT CAGCCACCGT ACCAATTTCG TCTGTGCAGC GCCCACTTAT TTTAAGAAAT ATGGCCGCCC AAAAACCTTG GATGAACTCA GTCAATACAG CTGCTTACTG GGTACATTGG ATTATTGGCA TTTTAAAGAA GAAGATACGG AGCGCAATAT ACGCGTGAGC GGCAAGATAC GTTATAACAG TGGTTATAGC TTAGTCGATG CGGCGCTAAA GGGGCTTGGT ATCGTACAAC TGCCGGATTA CTATGTGCAA AAACACCTCG TAACAGGACG TCTGATGACA GTATTGGATG AATATAGAGA GCAAGAAGAA GGGATTTGGG CCATCTACCC GCACAATCGT CATTTATCAC CAAAAATCAG ACTATTGGTA GACTATCTGG CAGAGCATTT GGCGTAA
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Protein sequence | MKWDGISEFV YVAELESFTK AAAKLAISTA QVSRQVTALE ERLNTKLLYR TTRKVSLTEE GRVFYQHCRS ILDGLDAAEQ AVSNLQSKPQ GRINLTAPVT YGEQQLLPLV NDFMVQYSDI EVTAFLSNQK IDLIEGGYDL AIRIGKLSDS TMMAKKLSHR TNFVCAAPTY FKKYGRPKTL DELSQYSCLL GTLDYWHFKE EDTERNIRVS GKIRYNSGYS LVDAALKGLG IVQLPDYYVQ KHLVTGRLMT VLDEYREQEE GIWAIYPHNR HLSPKIRLLV DYLAEHLA
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