Gene Psyc_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1662 
SymbolexbD 
ID3515630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2059781 
End bp2060182 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content45% 
IMG OID637670358 
Productiopolymer transport protein ExbD/TolR 
Protein accessionYP_264944 
Protein GI71066217 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00365164 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTC AATTGGGTGA TGATGATAGT CAAAGCATGA ATGAGATGAA CCTCATTCCG 
CTGATTGATA TCATGCTGGT ATTGATGATT ATCTTTTTGC TGACGGCTAG CGTACTGAAT
CCAGCGGTGC CATTAGATTT GCCAAAGACC AGTGCGACGT TAAATGAAAT CCCGCCCGAG
GCGATTCAAA TCAGTATTGA CAAAGACGCA GGCATATTTT GGGACAGCGA CCCTATTACT
ATGGAGGAGC TAGCAGTACG TTTGCAGCAG CAAAGTGCCA CTGGTAAAGA CCCTTCTGTA
CAGCTACGTG CGGATAAAGA CAGTAAATAT GATACGGTCG CCCAAGTGTT GGCGGCGGCT
AGTCAAGCGG GGTTAAGCAA AATAGCCTTT GTTAATGAAT AA
 
Protein sequence
MAFQLGDDDS QSMNEMNLIP LIDIMLVLMI IFLLTASVLN PAVPLDLPKT SATLNEIPPE 
AIQISIDKDA GIFWDSDPIT MEELAVRLQQ QSATGKDPSV QLRADKDSKY DTVAQVLAAA
SQAGLSKIAF VNE