Gene Psyc_1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1658 
Symbol 
ID3515626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2051749 
End bp2052441 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content45% 
IMG OID637670354 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_264940 
Protein GI71066213 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID[TIGR02727] 5,10-methenyltetrahydrofolate synthetase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00123721 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.619809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGA TTACTAGTCA ACAAAAATCC ACTAATTCAC TACCTCAGTT ATCTGTCGTG 
AGTAGTCGCG CTACCAATAA CGTCCAAACA GATAACACTA TTATCAATCC GCCCAGACGC
CATTTCACTC GCCAGCGTCG CCAGTTAAGT GAAAGCACGC GTAGGCAACT GGCGCATTCA
GCCAGCCTAC ATCTAACCAA ATTACAGCAG CGTCTGCCAC CGCGTGCACG CATTGGCTTA
TATTATGATG GCTTTGGTGA GCTGCCCACT CAGCCACTAT TGGACTGGTG TCAACGCTTA
GGCTATCTGC CATATTTGCC AGTGGTCGGC TCATTAGGAC AGCATGATAA ACGTCTGCGC
TTTGTACCTA TTTATCATGC AAAACTGTTA AATATACCGA CACGTATTCA TAGCTTAGGG
ATGAAGCAAA ACCATCATCG CAGATTATTG TGGGCAGCAG AATTAGATGT CATTATCTGT
CCATTAACAG CGGTTGATAA AAACGGCAAT CGCATGGGCA TGGGTAGCGG ATTTTATGAT
ACGACCCTTG GCAAAAGCTA TCAGGCTGGG GCAAAAAAAC CATTGAAAAT TGGCTGGTGT
TATGATTTTC AAGTGGTTGA GCAACTAGAT CGTCAACCGT GGGATGTGCC GTTAGATGGT
TTGATTACAC CAAGTGGTTT GAGGTGGTTT TGA
 
Protein sequence
MSKITSQQKS TNSLPQLSVV SSRATNNVQT DNTIINPPRR HFTRQRRQLS ESTRRQLAHS 
ASLHLTKLQQ RLPPRARIGL YYDGFGELPT QPLLDWCQRL GYLPYLPVVG SLGQHDKRLR
FVPIYHAKLL NIPTRIHSLG MKQNHHRRLL WAAELDVIIC PLTAVDKNGN RMGMGSGFYD
TTLGKSYQAG AKKPLKIGWC YDFQVVEQLD RQPWDVPLDG LITPSGLRWF