Gene Psyc_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1654 
SymbollldA 
ID3515622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2046659 
End bp2047867 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content48% 
IMG OID637670350 
ProductL-lactate dehydrogenase (cytochrome) 
Protein accessionYP_264936 
Protein GI71066209 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.445143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT TGAGCAAAAT TACTGAGATT GAAGACTTAC GGCGCGTGGC ACAACGAAAA 
ATACCTCGCA TGTTTTATGA TTATGTTGAC TCAGGCTCAT GGACCGAGAC CACCTATCGT
AATAATGAAA CTGACTTTGA CCGTATCAAA CTGCGTCAGC GGGTATTGGT CAATATGGAA
GGACGCTCGC TTGCCACCGA AATGCTGGGT ACGCCAGTAA AAATGCCGGT TGCTATTGCG
CCAACAGGCT TTACTGGCAT GATGTGGGCA GACGGAGAAA TCCTCGCGGC ACAGGCAGCA
GAAAAGTTTG GCGTACCGTT TTCACTATCG ACTATGAGTA TTTGCTCTAT CGAAGATGTA
GCAGAACATA CCAGCCAGCC CTTTTGGTTT CAGCTATATA TGATGCGCGA TATGGACTTT
ATAGCCAATT TGATTCGCCG CGCAAAAGAA GCTAATTGTT CAGCGCTTAT CTTGACCGCC
GACTTACAAG TACTCGGTCA ACGTCATAAA GACATTAAAA ACGGTCTATC TGCGCCACCA
AAACCGACGC TTGCCAACAT CTTAAACCTG ATGACCAAGC CGGAATGGTG TATGAATATG
CTCGGTACCA AGCGGCGCAC CTTTGGTAAT ATCGTCGGTC ACGCTAAGAA CGTTGAGGAT
ATCTCATCGC TATCAGCATG GACAGCTGAG CAGTTCGATC CTGCGCTGAG CTGGGACGAT
GTCGCCAGAA TTAAAGACAT GTGGGGTGGC AAGTTAATTA TCAAAGGGAT TATGGAGCCA
GAAGACGCCG TACTGGCAGC TCGTAGCGGT GCCGATGCGC TAGTGGTCTC CAATCATGGT
GGACGCCAAT TAGATGGTGC GCCCTCCTCC ATTTCATCCC TAGCCGATAT CGTACAAGCC
GTGCGTGCTG AGGACAGTCA GATTGAGATT TGGCTCGATA GTGGTATTCG CTCCGGTCAG
GATGTACTTA AAGCGATGGC ATTAGGAGCC AATGGCACGA TGATTGGTCG CGCCTTTTTA
TATGGTCTTG GCGCGTATGG CGAAGATGGT GTCCGCCGAG CGCTTGAGCT GATTTATAAC
GAATGTGATA TCAGCATGGC GTTTTGTGGT CATACCGATA TCAATGAAGT GCGCGATGAT
ATCTTAGTCA AAGGTACCTA CGAGCATCTT AAAACTGCCT TGCCTTACGT AGCGCCGATG
CGCTGGTAA
 
Protein sequence
MKNLSKITEI EDLRRVAQRK IPRMFYDYVD SGSWTETTYR NNETDFDRIK LRQRVLVNME 
GRSLATEMLG TPVKMPVAIA PTGFTGMMWA DGEILAAQAA EKFGVPFSLS TMSICSIEDV
AEHTSQPFWF QLYMMRDMDF IANLIRRAKE ANCSALILTA DLQVLGQRHK DIKNGLSAPP
KPTLANILNL MTKPEWCMNM LGTKRRTFGN IVGHAKNVED ISSLSAWTAE QFDPALSWDD
VARIKDMWGG KLIIKGIMEP EDAVLAARSG ADALVVSNHG GRQLDGAPSS ISSLADIVQA
VRAEDSQIEI WLDSGIRSGQ DVLKAMALGA NGTMIGRAFL YGLGAYGEDG VRRALELIYN
ECDISMAFCG HTDINEVRDD ILVKGTYEHL KTALPYVAPM RW