Gene Psyc_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1652 
SymbolglcF 
ID3515620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2043249 
End bp2044457 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content50% 
IMG OID637670348 
Productglycolate oxidase iron-sulfur subunit 
Protein accessionYP_264934 
Protein GI71066207 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0911371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACTC AAATTAATGT AAAATATCTG GATCACCCAG ATATTCAAGA AGCCGACGAT 
ATTTTGCGCA CTTGCGTTCA CTGTGGATTT TGTAATGCTA CGTGTCCTAC ATATCAAGAG
CTTGGCGATG AGCGTGACGG CCCTCGCGGT CGTATTTATT TACTAAAACA AATGCTTGAG
ACAGGTGATG TTAGCGAAAA ATCACAACTT CATTTAGACC GCTGCTTGAC TTGTCGTAGC
TGCGAGACTA CTTGCCCCTC TGGGGTAAAA TATGGCCGCT TGGCTGAAAT TGGCCGCGAT
ATTATGGAAA AACAGTTATC GCGACCTGCC GATCAAAGAT TCAAACGCTG GCTTATCAGG
AAGGTGTTGC CCTATCCGAA CCGATTTAGG TTTCTTTTAC GACTTGGACA ACTGTTTCGC
TCCTTTTTGC CCCGCGACTT AAAAGTCCAA GTCCCTGTTA AGCAAATCGC CCGCCCGCGA
CCCTCGCAGC AACACTCGCG TCAAATGCTG GTGCTAGAGG GCTGCGCCCA ACCTTCTGCC
ACCCCCAACA CCAACAGTGC CGCTGCCCGA GTACTTGATA AGCTAGGCAT CAGCTTGATC
GCTGCGCCAG ATGCCGGATG TTGCGGCGCT GTGAGCTATC ACATACCAGC CCATGAAGAA
GGGCTTGCGT TCATGCGGCG CAATATCGAT GCGTGGTGGC CATATATTGA AGCTGGGGCT
GAATCCATTG TCATCAGTGC CTCAGGCTGC GGCTCGATGG TCAAAGAGTA CGGCGAAAAA
CTCAAACATG ACGATGCTTA TGCGGCTAAA GCCGAACGTA TCAGTGCGCT GACCCGAGAC
CTGAGTGAGA TTTTAATCAA AGAGGACTTG GAGAAATTGG TAGTGAAACA GACGAATCGC
AAGACCGCTG TCCACTGCCC ATGCTCGCTA CAGCACGCTC AGCAGTTAGG CGGTCATGTT
GAGCAGATTT TGCAACGCGC TGGGATTGAG CTCTCTAAAA CCCAAAACGG ACATTTATGC
TGCGGCTCTG CTGGCACCTA CTCGCTCCTT CAACCTAAGC TGAGCCAGCA ACTACTCACC
AATAAGATCA CCGACCTTAC CATCGAGAAC CCAGATCAGA TTGTGACGGC CAACATCGGA
TGCCAACTGC ATTTAGGAAG CCATGCGTCT GTCCCGGTCA AGCACTGGAT CGAATTGTTA
GACCCATAA
 
Protein sequence
MRTQINVKYL DHPDIQEADD ILRTCVHCGF CNATCPTYQE LGDERDGPRG RIYLLKQMLE 
TGDVSEKSQL HLDRCLTCRS CETTCPSGVK YGRLAEIGRD IMEKQLSRPA DQRFKRWLIR
KVLPYPNRFR FLLRLGQLFR SFLPRDLKVQ VPVKQIARPR PSQQHSRQML VLEGCAQPSA
TPNTNSAAAR VLDKLGISLI AAPDAGCCGA VSYHIPAHEE GLAFMRRNID AWWPYIEAGA
ESIVISASGC GSMVKEYGEK LKHDDAYAAK AERISALTRD LSEILIKEDL EKLVVKQTNR
KTAVHCPCSL QHAQQLGGHV EQILQRAGIE LSKTQNGHLC CGSAGTYSLL QPKLSQQLLT
NKITDLTIEN PDQIVTANIG CQLHLGSHAS VPVKHWIELL DP