| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1650 |
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| Symbol | glcD |
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| ID | 3515618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 2040689 |
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| End bp | 2042167 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637670346 |
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| Product | glycolate oxidase subunit D |
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| Protein accession | YP_264932 |
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| Protein GI | 71066205 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.054636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGA GCTTAAGACC TGATAAAGCC GCTCTAGTAG AGCTGTTTCG CGATTTTATT
GAGCCTCAAT ATGTGATCAA TGATGAGGAG ACCCAAAAGC CTTTTGAGTG TGATGGCTTA
TCGGTGTATT GCGATATGCC GCTCATTACG GTGCTCCCAA AAACCGTTGA GCAGGTTTGC
GAGGTGATGC GTATCTGTTA TCGCTATCAA ATCCCTGTGG TGGCGCGCGG TGCCGGTACT
GGTTTGTGTG CAGGCGCGAT GCCCAACCCT GATGGCGTCT TATTGGTGTT GTCCCGATTT
AAGCATATCC TTGATATTGA TCCGCTTGCC CGTAGCGCGC GTTTGCAGCC AGGTGTCCGC
AACCTTGCTA TTAGTGAGGC GGCAAGTCCC TATGGCTTGT ACTATGGCCC AGACCCCTCC
TCACAGATTG CCTGCTCCAT CGGTGGCAAC GTCGCCGAAA ACTCGGGCGG CGTCCATTGT
CTCAAATATG GTCTGACCAC TCATAACTTA TTAAAAATTG AGATGGTCAC AGTCGAAGGA
GAGCTCATTA CTATTGGTAG TGAAGGTCTT GATAGCAATG GCTTTGATTT GATGGCTCTG
ATTACCGGCT CTGAGGGTCT ACTTGGGGTG ATTACTGAAG TGACGGTCAA GCTGCTACCT
AGCCCTGAAA AGGCTCAGGT CATTATGGCC GGTTTTGATA ACGTTCAGAC CGCAGGGGAT
GCAGTCGGCG GCGTGATTGC CAAAGGTATT ATTCCAGCCG GACTTGAGAT GATGGACAGC
CCAGCTATCA TAGCCGCCGA AGCGTTTGCT CATGCAGGCT ATCCAACTGA TGCCCAAGCT
TTGCTGCTGT GTGAGTTAGA TGGTAGCGAG GCGGAAGTTC AAGAACAGAT TGCAGAGGTT
GAGCAGCTGT TTATCGAGCT TGGCGCAACC ACAACGCGTG TCTCACAAAG TGAGGCGGAG
CGCGCTTTAT TGTGGAAAGG TCGAAAATCG GCATTCCCCG CTGTCGGACG AATATCTCCT
GACTACTACT GCATGGATGG CACCATTCCG CGTAGCCAAC TTGCCCACGT CCTAACAGAA
ATGCAAAAAC TCTCAGAGCA ATACGGTCTG CGCGTCGCCA ACGTGTTTCA TGCTGGGGAC
GGCAATTTGC ACCCGCTTAT CTTATTCGAT GCCAATGTGC CAGGAGAGCT TGAGCGCACT
GAAGAGTTTG GCAGCCGTAT TTTAGAGCTT TGCGTCAAAG TCGGCGGCTG CATAACTGGT
GAGCATGGGG TTGGTGTCGA AAAAATCCGC CAAATGACGA TTCAGTTTAA CGATCAAGAG
CTGACACAGT TTCATGCAAT CAAGCACGCC TTTGACCCAA TTGGCACGCT AAATCCGGGT
AAGGGCATTC CAGTGCTCAA GCGCTGTCAA GAGTACCGTA CCCTTGACAG ACCGCAACAC
AAACATGACT CTCAACCACA GCAAGGAGAT CTGGCATGA
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| Protein sequence | MNQSLRPDKA ALVELFRDFI EPQYVINDEE TQKPFECDGL SVYCDMPLIT VLPKTVEQVC
EVMRICYRYQ IPVVARGAGT GLCAGAMPNP DGVLLVLSRF KHILDIDPLA RSARLQPGVR
NLAISEAASP YGLYYGPDPS SQIACSIGGN VAENSGGVHC LKYGLTTHNL LKIEMVTVEG
ELITIGSEGL DSNGFDLMAL ITGSEGLLGV ITEVTVKLLP SPEKAQVIMA GFDNVQTAGD
AVGGVIAKGI IPAGLEMMDS PAIIAAEAFA HAGYPTDAQA LLLCELDGSE AEVQEQIAEV
EQLFIELGAT TTRVSQSEAE RALLWKGRKS AFPAVGRISP DYYCMDGTIP RSQLAHVLTE
MQKLSEQYGL RVANVFHAGD GNLHPLILFD ANVPGELERT EEFGSRILEL CVKVGGCITG
EHGVGVEKIR QMTIQFNDQE LTQFHAIKHA FDPIGTLNPG KGIPVLKRCQ EYRTLDRPQH
KHDSQPQQGD LA
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