Gene Psyc_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1621 
Symbol 
ID3515588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2003488 
End bp2004189 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content45% 
IMG OID637670316 
Producthypothetical protein 
Protein accessionYP_264903 
Protein GI71066176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000248924 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.236713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAA ACGCGTCTTT GCTAAAAAAA CTGTCTATGA GTGCTGTGTT TGTTGGTGCA 
GCTTCTGTCT CTATGCTGTC GCAAGCGGCA GTCACTTTAT TGGTTGATGA TCATATCAAA
GTAACGGCAA TCAATGGTCA AGAGCTGACA CAGAGTGTTT TTCAGCCATT AACCAAGTCA
TTTACCTTGC AGCCTGGCAA GCATGTGATT ACGGCCAAAT ATGACCGTCT CTATAACCTG
CGACACGATG AGCATGATTA TCTGCGTTCA GGTAATGTCA GTGTTGCCGC CGAAATGGTA
GACAATCAAA CTTATCGCTT AACCATGCCA AATCAGCCAG AAGACTATGC CGCTGCCAAA
ACCTATGCTG AGCGTCCAAC GTTAGCGATA CAACAGAATA ATGCCGTCAT CGCTAGTCAA
CAAAGTATTG CTGGTAACAA TGGCAGCTTA TTCTCAGGAC TCGGTAAAGC ATTAGGCGGC
GTTTTTGGTG GTAGCGGTGA TGCTGAGCTA CAAAATCAGC GTGCGATAGC CGCACTCGAT
CAACCATCTG TAAGCACTAA AGCGTCGGTA AATACGGGTG CCACTATGAC ACAAACGACG
AGTGTCAATG CTTCTACCAG TGCACTTGAT CAATTTATGC AGATTTGGCT ACAAGCCACG
CCTGCTGAGC GTGAAAAAAT GCGTCAATGG ATGCAAAAGT AA
 
Protein sequence
MKSNASLLKK LSMSAVFVGA ASVSMLSQAA VTLLVDDHIK VTAINGQELT QSVFQPLTKS 
FTLQPGKHVI TAKYDRLYNL RHDEHDYLRS GNVSVAAEMV DNQTYRLTMP NQPEDYAAAK
TYAERPTLAI QQNNAVIASQ QSIAGNNGSL FSGLGKALGG VFGGSGDAEL QNQRAIAALD
QPSVSTKASV NTGATMTQTT SVNASTSALD QFMQIWLQAT PAEREKMRQW MQK