Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1587 |
Symbol | |
ID | 3515552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1941230 |
End bp | 1943674 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637670280 |
Product | copper/silver efflux P-type ATPase |
Protein accession | YP_264869 |
Protein GI | 71066142 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.602341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCCTA ATAATAGCGA TAAAAAGAAT GGCCATAGTG GCCAAGAGTC AATGAATACT AATCAAACCC GTACTACCTT CAAAGAGTAT AACCAAGTGC CATCTGATTA TAATGGCACA GTTTATACCT GTCCGATGCA TCCAGAGGTG AGAGATGTTG AAAAAAGCGA TTGCCCAATA TGCGGTATGT TTCTCAAACC TGAGGGCGAG GTTGCTGATG AAGACAGTCA TTCACACTGT CATGGAAAGG ATACTGACCG TACTAAGGTA AAATCTGTCA AAGGCGGCAA GTACGATAAG GTGCCAGTTG GCTACAGCGG AACCGTTTAT ACCTGTCCTA TGCATCCCGA AGTCAGAGAT GTTGAGAATA GTGGCTGTCC GATATGCGGA ATGGCACTTG AATCAGAGAC AGCTACCATT GGTGAAGAAG ACACCTCAGA GCTCGACGAT ATGACACGCC GTTTCTGGAT ATGCACGGTG CTCACCATAC CGCTATTTCT CTATGCAATG AGCGATATGG TAGGTATAAA TTTAGACAAT CTTGGTCAGG GCAGTATCTC TGGGCAGATT GCGCAGTGGA TTCAGTTGGC GCTTGCGACA CCAGTAGTGC TATGGGGAGC AGCGCCTTTC TTCGTCCGTG GCTGGCAATC CATAAAAAGT CGCAACCTGA ACATGTTTAC TCTGATTGCA GTTGGCGTAG GCGCAGCTTT TGGTTTCAGT CTAGTAGCAA CCTTCCTTCC GGATATTTTC CCAGACAGCT TCAGGGACGC CACTGGCCAA GTTGGGGTGT ACTATGAAGC AGCAGCTGTC ATCGTGACCT TGGTGTTATT GGGTCAGGTG TTAGAACTAA AAGCCAGAAG TCAGACCTCA GGAGCAATTC GTGCTCTACT CGAGCTGGCA CCACCAACGG CAAGACGTGT GGATGAAAAC GATGTCGAGA CCGAAGTATC ACTTGACGAA GTTATCAGCG GCGACAGATT GCGAGTCAAG CCAGGAGAGA AGCTTCCGGT AGACGGCACG GTACTTGATG GTAGTAGTAG TATCGATGAA TCGATGGTGA CTGGCGAACC AATTCCGGTC TTAAAGGCAC AAGGGGATAC GGTCACTGGC GGCACGGTGA ACGGTACGGG GACCCTATTG ATTGAAGCGG TTGATGTCGG TGAAGATACG GTATTGTCCA AGATCGTCAA GATGGTTGCC GAAGCTCAGC GCAGTCGAGC GCCGATACAG CGACTGGCAG ATAAGGTGGC TGGGTGGTTC GTTCCAATCG TTATGCTCTG TTCTGTTGTG ACTTTTATTG TCTGGGCTAT GTTCGGGCCT GTGCCTGCGA TGGCCTATGC ACTGGTCAAT GCTATCGCTG TATTAATCAT AGCTTGCCCG TGTGCGTTAG GATTGGCTAC GCCAATGTCG ATTATGGTTG GTACCGGAAA GGGTGCACAG CATGGGGTAC TCATCAAGAA TGCTGAAGCG TTAGAGAGCA TGGAAAAAGT TGATACCATC GTTGTAGATA AGACAGGAAC GCTGACAGCA GGCAAACCGG AACTCACTGC TATCGAAGCG CTTGGCAGTA TAGATGAGGA TGAACTCTTT GTGCTTGTCG CAGCGGTAGA GAGTGCCAGC GAGCATCCTT TGGCAGAAGC TATTGTCAAG GCTGCGAAGG AAAAATCTCT CGATATTGCT AAAGCCAGCG ATTTCAGTTC AACCACTGGT GAAGGCGCTC AGGCACTGGT TAATGGCAAG CAGGTCGCCG TCGGCAACTC AAAATTCATG CAGCGACTTG ACAGTTTTGA TAGCTCGCTT TCAGAACGCG CCGACAAACG CAGGAAGGAC GGTGAAACCG TCATGTTCGT CGCAGTAGAT GGGCGAGCCG CTGGTCTAAT CTCAGTTGCT GATCCAATCA AGCCGAGTAC AAGTGAAGCC ATATCACTAC TGCACAAAGC TGGTCTGCGG GTGGTCATGC TGACAGGTGA CAACGAAATA ACGGCCAGAG CCGTTGCTAG TAAGCTGAAT ATTGACGAAG TGCATGCAGA TGTCTCTCCA GAAGACAAGA ACCGTATTAT TAAAGAATTA CAAAGTAGCG GTCAGATCGT AGCCATGGCG GGTGACGGTA TCAACGATGC GCCCGCTCTT GCACAGGCCA ATGTCGGCAT CGCCATGGGA ACTGGCACAG ATGTAGCCAT GGAGAGTGCT GGCATCACGC TATTGAAGGG TGATTTGATG GGCATTGTCA GAGCCCATAA ACTGAGCCGT TCCACGATGC GTAACATCAA GCAGAATCTG TTTTTTGCTT TTATATATAA CGCACTCGGC ATACCGCTGG CTGCTGGTGT CCTGTATCCA GTTTTTGGGC TTTTACTCAG TCCAATGATA GCGGCAGCTG CGATGAGCTT TTCTTCGGTA TCGGTTATTG GTAATGCGCT GAGACTGCGC CGTTTGAAAC TGTAA
|
Protein sequence | MNPNNSDKKN GHSGQESMNT NQTRTTFKEY NQVPSDYNGT VYTCPMHPEV RDVEKSDCPI CGMFLKPEGE VADEDSHSHC HGKDTDRTKV KSVKGGKYDK VPVGYSGTVY TCPMHPEVRD VENSGCPICG MALESETATI GEEDTSELDD MTRRFWICTV LTIPLFLYAM SDMVGINLDN LGQGSISGQI AQWIQLALAT PVVLWGAAPF FVRGWQSIKS RNLNMFTLIA VGVGAAFGFS LVATFLPDIF PDSFRDATGQ VGVYYEAAAV IVTLVLLGQV LELKARSQTS GAIRALLELA PPTARRVDEN DVETEVSLDE VISGDRLRVK PGEKLPVDGT VLDGSSSIDE SMVTGEPIPV LKAQGDTVTG GTVNGTGTLL IEAVDVGEDT VLSKIVKMVA EAQRSRAPIQ RLADKVAGWF VPIVMLCSVV TFIVWAMFGP VPAMAYALVN AIAVLIIACP CALGLATPMS IMVGTGKGAQ HGVLIKNAEA LESMEKVDTI VVDKTGTLTA GKPELTAIEA LGSIDEDELF VLVAAVESAS EHPLAEAIVK AAKEKSLDIA KASDFSSTTG EGAQALVNGK QVAVGNSKFM QRLDSFDSSL SERADKRRKD GETVMFVAVD GRAAGLISVA DPIKPSTSEA ISLLHKAGLR VVMLTGDNEI TARAVASKLN IDEVHADVSP EDKNRIIKEL QSSGQIVAMA GDGINDAPAL AQANVGIAMG TGTDVAMESA GITLLKGDLM GIVRAHKLSR STMRNIKQNL FFAFIYNALG IPLAAGVLYP VFGLLLSPMI AAAAMSFSSV SVIGNALRLR RLKL
|
| |