| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1562 |
|---|
| Symbol | |
|---|
| ID | 3515526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1912583 |
|---|
| End bp | 1913917 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637670254 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_264844 |
|---|
| Protein GI | 71066117 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0203187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.404493 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTAA CTTCATTGTG GCAAACAATC GCTGAGCACC CTGAATTTTT TGCCATGCTG
ACCATTCCGC CGGTGACAGC ATTTGTGACT TGGATTCATG TGTTGATGGC GCTCAAGATG
CTGTTTTATC CAATTAAGTT TCGCGGTATT CGCATCGCTA ACTTCCCGTT TTTTGGGCTA
CCAGGTCTTG GCTGGCAAGG TATTGTTCCA AGAAAAGCGG GTAAGATATC TGGCGTGATT
GTTGATCAGA CGCTATCGAA GTTGGGCTCA CTTGATGAAT TTTTTCAGGC GATGGAACCA
GACCAGATGG CGATATTCAT CACTGAGGCG GTCGATAAAA ACCTTGAAAG CTTGATTGAT
GAGATTATGC TCGATCACTC GCCGGCACTG TGGGGCAATC TTCCTTATGC GCTTAAGCGC
CGTGTCTATA CCCAAGCGCA CCAAGAGCTG CCAAGCATTA TGCAATCCTT GGTGACTGAC
TTGACTTATC ATGTCGAAGA TTTGGTCGAT ATGCGCAAGA TGATTGTCAA CAAGATGGAA
AGTGATCGTC GTTTGATGGT CAATATGTTC TTAAAAGTTG GACAAAAAGA AATCAATTTT
ATTTGGCATA TTAGTGCCTT GATTGGGCTA ATTTTTGGCA TTATCCAAAT GTTTATATTT
TTGGTAGTGC CGCAACATTG GACAGTACCT TTCTTTGCTG CTATTTGGGG TTTTCTTACT
AACTGGATTG CGATTTGGAT GGTATTTAAT CCTGTAGAGC CACATTTTAT CCGTTACGTG
AAGTTTTTTG CCTTACAGAG TCGTTTCCCT TTTATCAAAC CGCAATTACC GCACATCGCT
CGATATCGTT TCCAAGGTGG CTTTATGAAG CGCCAAGAAG AGGTGTCTGA GGTTTTTGCT
GAAATTGTGG TCAAGGATTT AGTGACGCTT GAGAACATCA TGAATGAGAT GATGTATGGT
GACCACGCCA TCGAAACGCG TGAGTTGATG AAGTCGCATC TGTACAAGGT ATTGGAGTCG
CCAGTGATTA ATACGACTTT ACGATTAGGA CTGGGTCGCC GCGAATTTGG GCAATTAAAA
AATACTATCA TTGATAAATC TATCGTTGCA ACGATGGTGC CACTACGTGA TCCTGAGCTT
AATGAAAGCC GTGCCAGTAA GATATTTGGG CTATTTCGTG ACCGCATTCG CGCGCTCTCA
CCCGATGAAT TCCAAAACTT ATTACGTCCT GCCTTCCGTG AAGATGAAAT GACGCTAATT
GTGCTGGGCG GCTTAACAGG ATTTTTGGCA GGTTGGTTGC ATCTGGTCTT GGTGTTTTCC
CCTGCCATGC AGTGA
|
|---|
| Protein sequence | MDVTSLWQTI AEHPEFFAML TIPPVTAFVT WIHVLMALKM LFYPIKFRGI RIANFPFFGL
PGLGWQGIVP RKAGKISGVI VDQTLSKLGS LDEFFQAMEP DQMAIFITEA VDKNLESLID
EIMLDHSPAL WGNLPYALKR RVYTQAHQEL PSIMQSLVTD LTYHVEDLVD MRKMIVNKME
SDRRLMVNMF LKVGQKEINF IWHISALIGL IFGIIQMFIF LVVPQHWTVP FFAAIWGFLT
NWIAIWMVFN PVEPHFIRYV KFFALQSRFP FIKPQLPHIA RYRFQGGFMK RQEEVSEVFA
EIVVKDLVTL ENIMNEMMYG DHAIETRELM KSHLYKVLES PVINTTLRLG LGRREFGQLK
NTIIDKSIVA TMVPLRDPEL NESRASKIFG LFRDRIRALS PDEFQNLLRP AFREDEMTLI
VLGGLTGFLA GWLHLVLVFS PAMQ
|
|---|
| |