| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1561 |
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| Symbol | ccmF |
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| ID | 3515525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1910299 |
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| End bp | 1912344 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637670253 |
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| Product | cytochrome c-type biogenesis protein |
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| Protein accession | YP_264843 |
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| Protein GI | 71066116 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.77201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.310028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAATCA CAGAATTGGG TTATTTTGCC GTGCTAGCCG CCTTTATGTT GGCGATTTTG
CAGGTAGTAT TACCAACAAT AGGCGTTATG CGTGACCATG TTGCTTGGCA GCGTTTGGCA
CCGAGCTTGG CGTGGGCGCA GTTTGCAGCC ATGATTACCT CGTTTGGCGC ACTAATGGCA
GGCTTTTATT TTAATGACTT TAGCCTTGTC TATGTGTCGC AGCACTCGAA TACTTTGCTG
CCTTGGTATT ATAAGCTATC AGCGACGTGG GGCGGGCATG AAGGCTCGCT CCTGCTATGG
ATGACTATCA TGGCAACGTG GTGTGCCTTG GTCTCATACT TTAGTCGTGG TTTACCATTG
TCGATGCGCG CGCGCGTATT GGTGATATTA GCCGGTGTAC AGATGATGAT GCTGGCAATG
CTCATCTTTA CCTCGTCACC GTTTGACCGC ACTTTACCAA ACCTGCCAGT GGATGGTGCT
GACCTAAATC CTGTCTTACA AGACTTTGGT CTAATTATCC ATCCACCGAT GCTGTATATG
GGCTATGTTG GTATGGTGGT GCCGTTTGCA TTTTGTATGG CAGCATTGTG GGAAGGTCGC
TTGGATGCGG TATGGACACG CTGGTCACGT CCATGGGCAT TGGCTGCTTG GGGGTTTTTA
ACCATCGGTA TTGCACTAGG TTCGTGGTGG GCATATTACG AGCTTGGTTG GGGTGGGTGG
TGGTTTTGGG ATCCAGTAGA AAACGCTTCA TTGCTGCCTT GGCTGGCAGG TTTGGCATTG
CTACATTCGC TTGCAGTCAC TGAAAAGCGT GGTGTCTTTA AAGCGTGGAC GATTATGCTG
GCAATTTTTG CCTTTGCATT AAGCTTACTC GGGACATTTT TGGTACGCTC TGGGGTAATT
ACCTCTGTGC ATTCATTTGC CGCAGATCCC ACGCGTGGTT TAGTGGTTTT AGCGATTCTT
GGGATTATTA TTGGTGGTGG TTTATTGATG TTTGCTGTAC GTGGCTGGCG TCTTACGATC
GAGAGTCAGT ATCAGCTGAT TTCACGTGAG TCGTTTTTAG TCATTAACAA CGTCATTATT
TTGATTGCGA CCTTAGTGGT ATTACTTGGT ACGCTATATC CCATCATTGC CGATGCCTTT
AATTTAGGTC AGGTATCCGT AGGTCCTCCG TATTTTAATG CGCTGTTTGT ACCGTTGACT
TGGCTATTGA TGGTAGCAAT GGGCATGGGC TCTAATATCC GCTGGAAACA AGACAGCCGT
CCGTTATTGG GCGTTGGCAT GGTCATTGCG GCAAGTAGCC TTGTTTTAGC CGCAGTTATT
GCCTATTTTG TTAGCCCATC TGCCATGCTC AATATTGGCG TGACGCTAGC GGTGAGTTTT
TGGGTATTGT TATGGATGGT AGTTGATTTT AAAGACAAGA CCAAAAATGC CCCAAGCTTC
TTTAAAGGCT TAGCTAAGCT GCGTTTAAGC TACTGGGGTC AGCAGACAGC TCACATTGGC
GTTATTATAG CGGTCATTGG TATTGCCTTT ACCAGTACCT TAAGTATTGA GCGCGATGTG
GCATTGGGTG AAACGGATAC TGTTCATGTG CAAGGGTACG ACTTTGAAAT AAAAGACTTC
CATGAAGTCA GAGGCAGTAA CTTTGATGGT ATGCAAGCAG AAGTTGAAGT GACCAAAGAC
GGTCGCCCAG TCGTTACTTT ATATCCAGAA AAACGTACCT ATGTTATCAG TGGTATGCCA
CTGACTGAGG CAGCGATTGA TGCCAGCCTT ATGCGTGATG TGTACGTAGC ACTCGGTGAG
CCTATCGCTG AAGACGGCAA CCAATGGGCG ATACGTATTT ACGTGAAGCC ATTGATTCGC
TGGATATGGC TTGGCGCTAT TATTATGGCA TTGGGTGGTC TGCTGAGTAT GCTTGATAGG
CGCTATCGTC TCAAAACAAC TAAGACGCCC GCTCAAATCG CAGCGAGTAA GTCAGGTTTT
GCGACCGTTG CTGACTTAGA TATTAACAAT GCGACAGATG CCACGGCACC AATGGGGGAG
AAGTAA
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| Protein sequence | MLITELGYFA VLAAFMLAIL QVVLPTIGVM RDHVAWQRLA PSLAWAQFAA MITSFGALMA
GFYFNDFSLV YVSQHSNTLL PWYYKLSATW GGHEGSLLLW MTIMATWCAL VSYFSRGLPL
SMRARVLVIL AGVQMMMLAM LIFTSSPFDR TLPNLPVDGA DLNPVLQDFG LIIHPPMLYM
GYVGMVVPFA FCMAALWEGR LDAVWTRWSR PWALAAWGFL TIGIALGSWW AYYELGWGGW
WFWDPVENAS LLPWLAGLAL LHSLAVTEKR GVFKAWTIML AIFAFALSLL GTFLVRSGVI
TSVHSFAADP TRGLVVLAIL GIIIGGGLLM FAVRGWRLTI ESQYQLISRE SFLVINNVII
LIATLVVLLG TLYPIIADAF NLGQVSVGPP YFNALFVPLT WLLMVAMGMG SNIRWKQDSR
PLLGVGMVIA ASSLVLAAVI AYFVSPSAML NIGVTLAVSF WVLLWMVVDF KDKTKNAPSF
FKGLAKLRLS YWGQQTAHIG VIIAVIGIAF TSTLSIERDV ALGETDTVHV QGYDFEIKDF
HEVRGSNFDG MQAEVEVTKD GRPVVTLYPE KRTYVISGMP LTEAAIDASL MRDVYVALGE
PIAEDGNQWA IRIYVKPLIR WIWLGAIIMA LGGLLSMLDR RYRLKTTKTP AQIAASKSGF
ATVADLDINN ATDATAPMGE K
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