Gene Psyc_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1558 
SymbolcycH 
ID3515522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1907795 
End bp1909075 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content46% 
IMG OID637670250 
Productcytochrome c-type biogenesis protein 
Protein accessionYP_264840 
Protein GI71066113 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID[TIGR03142] cytochrome c-type biogenesis protein CcmI 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000144138 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.094009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTAT TTTCTACTTT TGGCTTATTT ATTGCCCTAA GCTTACTGGT TGCACTCGTA 
CTGGCAGTTA TCGTTATCAT GCCTTGGCTA CGAGCGTCAC GTTTACGAGA AAATCCCGTT
GACAATCAGC TGCTAGATAT CAATATTAGT GTATTTCGTG AACGTTTGAC AGAATTACAA
TCGGACAAAG ACAATGGCAC TATTGATGAT GCCCATTATC AAAATCAGAA AATTGAGCTT
GAGCGCCAGC TATTGGATGC TCAGCGTGAA GTCACTCCAA TGGTTGCGCC TGGTATCAAG
AGTCGTTTGA TTATCATAGT ATGGGTGCCT GTGCTGGCAG CATTGGCTTA CTTTTTGGTG
GGTGACCGTA CACCGGTGTT CGATTTGTGG GCGGCGGAGG ATAAAGTTGC TCAAGTGGCA
GATGACTTAT TGACCGGCAA GATTGATCAG CCGCCAGCTT GGGCAATTGA AGATGGTACT
CAGTTGATCA GTGCGATGCA GACCAACGTC TATCGTCATG CTGATGATCC TGATCGCTGG
ATGCGTTTAT CAGAGCTGTT CTTATCTTTG GAAGCCACCG ACTCAGCCAT TGAAGCCTTG
TCTCGTGCTT ATCGTCTGTC ACCAGACAAC GAAGAGATCG CCACCACCTA TGCGCAGATT
AGTTTTTTTG CCAATAAAGG TCAGTTGGAT GCCAATAGCC GCCGTGTTCT GCAAGATGTC
CTTGCCAAAA ATCCGCAGCA CGAAGGTGCG CAGATGCTGA TGGCAATGGG TGAGGCGCGT
GGTAATAATT TTGAGCAAGC ACAAGGTTGG ATTAAGCGTT TACGTAAGAA TATTGCTGCC
AAACCAGGTG ATCATACTCA AGCACTGAGC AGTCTTGATG AGCTAAGCGC CAATGTCAAG
GCGCAAAAGC AGCAAGCATC TGAAGGCATT GAGGTGACTG TATCTATTGA TGATAAGTTG
TTGCCACTAG TGAAAGCTGA AGATGTGTTG TTTGTCGCGA TACGTGACGT TAAAGGTGGT
CCGCCATTTG CCGCCAAGCG TTTACCGATT AGCATTATTA AGCAAGGCAA AGCAACTATT
AGCCTGAGTG ATTTAGATGC TATGATGCCA GAGCGTACAC TAAAATCTGC TCGTGATGAA
AAAGTTCAGT TGGCAGTGAT TGCTCGCATC AGTCATAGCG GCACTGCCAT TGCAGAGTCG
GGCGATTTAT CAGGTAATCC GGTGGTGATA AGCGTCGAGC AAAATCAGGT CAATGTTGAT
ATTAACCAAC AAGTTCCTTA A
 
Protein sequence
MTLFSTFGLF IALSLLVALV LAVIVIMPWL RASRLRENPV DNQLLDINIS VFRERLTELQ 
SDKDNGTIDD AHYQNQKIEL ERQLLDAQRE VTPMVAPGIK SRLIIIVWVP VLAALAYFLV
GDRTPVFDLW AAEDKVAQVA DDLLTGKIDQ PPAWAIEDGT QLISAMQTNV YRHADDPDRW
MRLSELFLSL EATDSAIEAL SRAYRLSPDN EEIATTYAQI SFFANKGQLD ANSRRVLQDV
LAKNPQHEGA QMLMAMGEAR GNNFEQAQGW IKRLRKNIAA KPGDHTQALS SLDELSANVK
AQKQQASEGI EVTVSIDDKL LPLVKAEDVL FVAIRDVKGG PPFAAKRLPI SIIKQGKATI
SLSDLDAMMP ERTLKSARDE KVQLAVIARI SHSGTAIAES GDLSGNPVVI SVEQNQVNVD
INQQVP