| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1549 |
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| Symbol | kdtA |
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| ID | 3515511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1897307 |
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| End bp | 1898875 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637670239 |
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| Product | three-deoxy-D-manno-octulosonic-acid transferase |
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| Protein accession | YP_264831 |
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| Protein GI | 71066104 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.207056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.549765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCTT CTGACACCTC AAAAAATCTT TCCGATAACG CTTTGCCTAT GCAAAGCCGA
GCGGTACATA AGCCACCTGT TTATTATCAA TTAAGTATTG GTTTACTAAA GCCGCTATAT
CGACTACAGG TATGGCGTCG CTCGCATGCG CGTGATAATT ATCAGCAAGA AGTTGAGCAG
CGTTTTGGTA AGCGTTATCC TGCGCCTCCT ATAGCGACAC AAACGCCTAT GCCAGCTGCG
AATTTAAATA GCAGCAGCAT CAATATTAGT AAGCAAAATA AAACCATCTG GTGCCACGCG
GTCTCTTTAG GTGAGACCAA TACCGTTGCG CCATTATTGG ACGTGCTATT GGCTTGTGGT
TACCGGATAT GGCTGACCAA TACCACTCAG ACGGGTTTTG CACGCGGTGC CAGCCGATTT
GCAGAAGACA TTGCGCAGGG GCGATTAAGT CACAGCTATG TGCCGGTTGA TAGTCCAGCG
GTGATTGAAA GGTTTTTAAA TCATGTGCAA CCTATCGCTG CTTTGTTTGT AGAAACGGAG
CTATGGGCAA ACATCTTAAC CAAACTGTCT GAGCATCATA TCCCGAGTAT CTTGGTCAAT
GGGCGACTGT CAACATCCTC TTTTAAAAGC TATCAAAAGA TTGGGGCGGT AAGCGCAAGC
ATGGTGAAAA ACCTGAGCTT AATCATTGCG CAGGATAATG ACTCCGCCAA ACGCTTTCGG
CAATTGGGTG CGCATAGCGC CCAGATCCGT GTAGCAGGCT CGCTAAAGTG GGTTATTAAT
ACGCCTAAGC TTAATGATAA TGTCGCTGAC ATAGACGGTG ATATAACCCA TAAGCTTACG
GATATAGAAG CACGTACGAG TGATATTGCT GCAGATTTAG GTATTATTAA TCGCCCAATT
TGGGTGGCAG CAAGTACTCA TAGTGGTGAA GAAAATACGG TACTGTCATG GCAACAGCAA
TTACTGTCAA ACTCTGCATT GGCAGAGGTA CTGCTTATTA TCGTCCCAAG GCATCCAGAA
CGCTTTGATG AAGTAGCAGC GCTTATCCAA AAATCGGGAT TGATCATGGC GCGGCGCAGT
GCAGCAGAGG CTATAGATAT CAACACTCAA GTCTATCTGG CAGACAGTAT GGGCGAACTG
ATGAATTGGT ATACGCTTGC AGATGTGGCA TTGGTTGGCG GCTCATTGGT CGAAGTTGGC
GGACATAATC CGGTTGAGCC GGCAAGTGTG GCGACACCGG TGTTAATGGG CATTTACACT
CAATCTTGCC AAAGCGTCGT GGATAAATTG GCGAGCGTAG GGGCGTTATA TCAGCCAAAC
AATGATTTTT ATCGTCCTCT TGATAGTGTT GATCAAGCCA TAAAGCACCC AAAATCTGTA
GATAATAAAA TGCTTCTTTG TCAACAGCTA AAATATTGGC TGAGTCATTT AACGTTGGCC
AAGCAGGCAG GACAAGCGGG CGCACAGATG ACTGAGCAAC AGCAAGCAGT ATTGAGTCGT
CAGTTATCGA TGATCGAAAA GGTTATCGAG CAGCATGCTA TGCAAAACGT TAGCCAAGAT
TTAAACTAA
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| Protein sequence | MPSSDTSKNL SDNALPMQSR AVHKPPVYYQ LSIGLLKPLY RLQVWRRSHA RDNYQQEVEQ
RFGKRYPAPP IATQTPMPAA NLNSSSINIS KQNKTIWCHA VSLGETNTVA PLLDVLLACG
YRIWLTNTTQ TGFARGASRF AEDIAQGRLS HSYVPVDSPA VIERFLNHVQ PIAALFVETE
LWANILTKLS EHHIPSILVN GRLSTSSFKS YQKIGAVSAS MVKNLSLIIA QDNDSAKRFR
QLGAHSAQIR VAGSLKWVIN TPKLNDNVAD IDGDITHKLT DIEARTSDIA ADLGIINRPI
WVAASTHSGE ENTVLSWQQQ LLSNSALAEV LLIIVPRHPE RFDEVAALIQ KSGLIMARRS
AAEAIDINTQ VYLADSMGEL MNWYTLADVA LVGGSLVEVG GHNPVEPASV ATPVLMGIYT
QSCQSVVDKL ASVGALYQPN NDFYRPLDSV DQAIKHPKSV DNKMLLCQQL KYWLSHLTLA
KQAGQAGAQM TEQQQAVLSR QLSMIEKVIE QHAMQNVSQD LN
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