Gene Psyc_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1540 
Symbol 
ID3515502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1884847 
End bp1885833 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content44% 
IMG OID637670230 
Producthypothetical protein 
Protein accessionYP_264822 
Protein GI71066095 
COG category[R] General function prediction only 
COG ID[COG2607] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.293858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAT CACCCAAGCC CGTTATGAAT TATGCCCTGC CCGACCATTT ATTGGATTTA 
CTCGGGAAGT ATCTGCAAGA GCAGGTCACG CCAACCATTG AGATCGATCC TGCGCAGCTG
GCTTATCGCT GGGTCGGTGG GCAGACTGGA CATTTAGAGC CGCTAGCCGT TAATTTATTT
TTAAATTTAG ATGACTTACA TGGTATCGAT ACCCAAAAAT CAAAGCTGGT ACAAAACACG
TGTCAATTCC TCAAAGGCTA TCCTGCCAAT CACGTGTTGA TGACAGGGAC ACGGGGTGCT
GGAAAATCAT CGCTGATTCG GGCATTGCTA CAAGCCTATC ATAATGAAGG TCTGCGCATT
ATTGAAATTG CCCGTGATGA TTTAAAAATG CTTGATAAAA TACGGGCAGC GATTAAAGCA
TTGCCAGCTG ACTGCAAATG TCGCTATGTG GTGTACTGTG ATGACTTGGC ATTTAATGGT
CAAGATGAAA GCTACCGTAC CTTAAAAAGT GTGCTCGATG GCGCCCTTGA TTCAGAGCAA
GACAAGTTAT TGGTCTATGC GACCAGTAAC CGCCGCCATC TACTACCGCA GCTGATGAAA
GACAATGTTA ATATTTATAA TGGTCAAACC GATGAGGTTA ACCCTTATGA GACCATCGAT
GAGACGGTGT CATTATCTGA CCGTTTTGGT TTATGGCTAT CATTTCATCC AATGGATCAA
AACACTTATT TACACATCGT GCATCATTAT TTATCTATTC AACAGAAAAT CGATGCTAGA
ACTCTTCATG ATGACATGCA CGGTGATGCA GCAAATAAAG GTGCAGAGAG CATTGATGAG
CTACCCACTC ATATCAGAGC AGCCGCATTA CGCTGGGCAT CAGAGCGCGG TGGACGTTCG
GGACGAGTGG CGTATCAGTT TAGTCGTTAC TGGATAGGAC AGACCCAATT GGCAGCTGAA
GACAACCTTT CTCAAAAATT CATCTGA
 
Protein sequence
MSQSPKPVMN YALPDHLLDL LGKYLQEQVT PTIEIDPAQL AYRWVGGQTG HLEPLAVNLF 
LNLDDLHGID TQKSKLVQNT CQFLKGYPAN HVLMTGTRGA GKSSLIRALL QAYHNEGLRI
IEIARDDLKM LDKIRAAIKA LPADCKCRYV VYCDDLAFNG QDESYRTLKS VLDGALDSEQ
DKLLVYATSN RRHLLPQLMK DNVNIYNGQT DEVNPYETID ETVSLSDRFG LWLSFHPMDQ
NTYLHIVHHY LSIQQKIDAR TLHDDMHGDA ANKGAESIDE LPTHIRAAAL RWASERGGRS
GRVAYQFSRY WIGQTQLAAE DNLSQKFI