| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1536 |
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| Symbol | rimO |
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| ID | 3515497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1878243 |
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| End bp | 1879820 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637670225 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_264818 |
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| Protein GI | 71066091 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0262193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAA TTTCTACCGA GTCCGTTAAT ACGACTATTG CCCCTTCACA GCCAGCTTCT
ACTGCCCCAA AAGACACTGC CACTCTCTTT AATCCTGCCA AGCCGACAGC AACGCCCGCG
CAAAGCTCTA TAGACAGTGT TCAACCTTAC CACCATAAAG CCAATCATAA TCAAAACCGT
AGCATTGCCC AAAGTGGTGA TGCAACTAGC AGCGCGACAG CCTCTAGTTC AGTAACAGCA
GCGCCAAAGA TTGGTTTTGT ATCGCTTGGT TGTCCAAAAG CTTTGGTGGA TAGTGAGCGT
ATTATTACAG AACTGAGCCG TGATGGTTAT CAAGTTGCTA GTGACTATGA CGGTGCAGAC
TTAGTTGTGG TTAATACTTG CGGCTTTATT GAGTCAGCGG TACAAGAGTC GCTAGATGCC
ATCGGTGAAG CGATTAGCAA GAACGGTAAA GTGATTGTGA CGGGTTGCTT GGGTAAAGAA
GCAGATAAAA TTCGTGAAAT GCATCCTGCC GTGCTAGCCG TGACTGGTGC TCATGCTTAT
GACGAAGTGA TTAGAGCAGT TGCACTGCAT GTGCCCAAGC CTGACCGTAG TTTGGATGCC
AGTTATGATC CAAAAATAGA TTTGATTAAT GAGGCGGGCA TTAAATTAAC GCCTAGCCAT
TATGCCTATC TAAAAATTTC AGAAGGCTGT AACCACCGTT GTACCTTCTG CATTATTCCA
AGTTTACGCG GTGACTTGGT TTCGCGTCCG ATTGACAGTG TGATGAATGA AGCACTGGCA
CTGAAAAAAG CGGGTGTAAA AGAGCTGTTG ATTATCTCGC AAGATACCTC CGCTTATGGG
CTGGATTTAA AGTATAAGAC CAGCTTTTGG AATGGTATGC CGCTTAAGTC AAAATTTTAT
GACTTATGCC AAGCGTTAAA CGATTTGGGT ATTTGGGTGC GTCTGCACTA TGTTTATCCG
TATCCACACG TGGATAAAGT CGTTGAACTC ATGGGCGAGA AGAAGTTATT ACCGTATTTA
GATATCCCGT TCCAACATGC CAGCCATCGC ATTTTAAAAG CGATGAAACG CCCTGCGCAT
AGCGAAAATA CCTTGGCGCG TATCCATGCA TGGCGTGAGA TTTGCCCTGA TATCGTTATT
CGTTCAACGT TCGTCGTTGG CTTCCCAGGG GAAACTGAAG AAGACTTTCA ATGTTTGCTA
GATTGGTTGG TTGAAGCCCG CCTTGATCGC GTTGGTGCTT TTACCTATTC AGAAGTTGAA
GGTGCGGTCG CCAATGACTT GCCAAATCAT GTGCCAGAAG ACGTTAAACA AGAGCGCTAT
GAGCGTTTGA TGACATTACA GCAAGATATC TCAGCTCAAA AACTGCAAGA AAAAATCGGC
AAAACCTTGA TGGTATTGGT GGACGAAATT GATAGAGAAG AGGGCGTAGC GATTTGCCGT
AGTTATGCTG ACGCGCCTGA GATTGACGGT CATGTCTATG TCGATGATAT TGACGCTCAC
GTCAAAGTCG GACAGTTCTT AACGGTTACC ATCGATGATG CTAGCGAATA TGATTTATTT
GCCAGTTATC AAGCCTAA
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| Protein sequence | MPKISTESVN TTIAPSQPAS TAPKDTATLF NPAKPTATPA QSSIDSVQPY HHKANHNQNR
SIAQSGDATS SATASSSVTA APKIGFVSLG CPKALVDSER IITELSRDGY QVASDYDGAD
LVVVNTCGFI ESAVQESLDA IGEAISKNGK VIVTGCLGKE ADKIREMHPA VLAVTGAHAY
DEVIRAVALH VPKPDRSLDA SYDPKIDLIN EAGIKLTPSH YAYLKISEGC NHRCTFCIIP
SLRGDLVSRP IDSVMNEALA LKKAGVKELL IISQDTSAYG LDLKYKTSFW NGMPLKSKFY
DLCQALNDLG IWVRLHYVYP YPHVDKVVEL MGEKKLLPYL DIPFQHASHR ILKAMKRPAH
SENTLARIHA WREICPDIVI RSTFVVGFPG ETEEDFQCLL DWLVEARLDR VGAFTYSEVE
GAVANDLPNH VPEDVKQERY ERLMTLQQDI SAQKLQEKIG KTLMVLVDEI DREEGVAICR
SYADAPEIDG HVYVDDIDAH VKVGQFLTVT IDDASEYDLF ASYQA
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