| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1526 |
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| Symbol | lpxA |
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| ID | 3515487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1866370 |
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| End bp | 1867149 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637670215 |
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| Product | UDP-N-acetylglucosamine acyltransferase |
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| Protein accession | YP_264808 |
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| Protein GI | 71066081 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
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| TIGRFAM ID | [TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000000252979 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00731319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAGTCAGA TCCATCCAAC AGCACTCATC TCACCGTCTG CTACGATTGA TGAAACCGCA
ACTATTGGCC CTTACTGTAT CGTCGGTGAT GAGGTTACGA TTGGTGCCCA TACGGTGTTG
CATCGTCATG TGGTTGTCAC TAGATTGACT CGTATCGGTG AACACAATCA GTTTTATCAA
TTTTCAAGCA TTGGTGAAGA CCCACAGGAC TTAAAGTATG CGGGCGAGCG TACTTGGCTT
GAGATTGGTG ATCATAATAC CATTCGCGAA GCCTGTAGCT TGCACCGTGG TACTGAGCAA
GATGGTGGCT TGACCAAGAT AGGCAGTCAT AACTTGTTAA TGGTCAATAC CCATGTGGCT
CACGATTGCT TAATTGGTGA CCACAATGTA CTGGCCAATA ATGTCGGCGT CGCCGGTCAC
GTTACCATTG GTAATCATAT TATCGTCGGT GGTAACTCAG GCATTCATCA GTTTTGTACG
ATTGATGATT ACAGTTTGGT TGGTGGTGCA ACTTTAGTCT TAAAAGATGT AGCGGCGTTT
ACCATGGTTT CAGGTAATCC AGCCAAGGCG CACGGTCTTA ATGTCGAAGG CATGCGCCGT
AAAGGCTGGT CTAAAGATAG CATCGATGTG CTGCGTCAAG CTTATCGTGT TGTATTCAGA
TCCGGTTTAA CGACGGTGCA AGCACTTGAA GTATTGAAGC AAGATTTGCT ACCAAAAGAG
CAAAAAATCG AGTTTTTGAT TGATTCGCTA CAGAAAAGTC GCCGCGGTGT TGTTCGTTAA
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| Protein sequence | MSQIHPTALI SPSATIDETA TIGPYCIVGD EVTIGAHTVL HRHVVVTRLT RIGEHNQFYQ
FSSIGEDPQD LKYAGERTWL EIGDHNTIRE ACSLHRGTEQ DGGLTKIGSH NLLMVNTHVA
HDCLIGDHNV LANNVGVAGH VTIGNHIIVG GNSGIHQFCT IDDYSLVGGA TLVLKDVAAF
TMVSGNPAKA HGLNVEGMRR KGWSKDSIDV LRQAYRVVFR SGLTTVQALE VLKQDLLPKE
QKIEFLIDSL QKSRRGVVR
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