| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1502 |
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| Symbol | hemE |
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| ID | 3515463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1823686 |
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| End bp | 1824822 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637670191 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_264784 |
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| Protein GI | 71066057 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGCTT CAGACAATAA TAATTCGCTT GAAAAAAACT TTGCGCCTTT GAAAAATGAT
AGATTGCTAC GAGCACTTCG TTTTGAGCCG ATAGATACCA CGCCGGTATG GATGATGCGC
CAAGCTGGTC GTTATTTACC AGAATATAAA GCCACCCGTG CTGAAGCAGG TGATTTTATG
AGCCTGTGTA AAGATACCGC GCGTGCCACT GAAGTTACCT TGCAGCCATT ACGTCGTTAT
GATTTAGACG CGGCTATTTT ATTCAGTGAT ATTTTAACCA TTCCTGATGC GATGGGATTG
GGTTTATATT TTGAAGCTGG GGAAGGGCCA AAGTTTAAAC ATCCTATTCG CCAGCAAGCT
GATTTAGATA GATTGCCTGT GCTTGATGTC AATGACTCTC TTGATTATGT CATGCGTGCG
GTGACCAGTA TTCGTACAGC ACTTAATGGA CAAGTACCTT TATTTGGTTT TTCTGGTAGT
CCTTGGACAC TAGCGACTTA TATGATTGAA GGTGGTAGCT CAAAAGATTA TCGCTATACC
AAAGGATTTT TATATAGTAA TCCTGAGTTC TTACATCAAT TATTGGATAA ATTAGCGACG
TCTGTGATTG ATTATCTCGA TGCCCAAGTC GTGGCAGGCG CACAGATACT ACAGATATTT
GATAGTTGGG GCGGCGCGCT TGGTCATCGT CAGTTTGTTG ATTTTTCACA TGCGTATAAT
AAGCGTATTG TTGCTGAGCT AAAGGTACGC CATCCTGAAA TACCAGTGGT ATTATTTACT
AAAGGTGGCG GATTATGGTT GGATATACAA GCCGATAGTG AAGCGGATGC GTTGGGTTTA
GACTGGACGA TGCCGATTGA TCGTGCCCGT CAAGTATTGA CTGAAAGTCA GCGTCAGTTA
ACTAAGCAAC ATAAAAAACT ACACAGTAGT AAAGCTATTC AGGGTAATTT AGACCCAGCA
ACTTTATACG GTTCACCTGC GACTATCCGT GCCGAAGTCA ATGCAATGCT TGATAGTGCT
TATGCTAACG GCGAAAAAAC CGGCTATGTG GCAAACTTAG GTCATGGTAT TACCCAGTGG
GTCAATCCTG ATAATGCCAA AGTGTTTATC GATGCGGTCC ATGATTATAA AATTTAA
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| Protein sequence | MSASDNNNSL EKNFAPLKND RLLRALRFEP IDTTPVWMMR QAGRYLPEYK ATRAEAGDFM
SLCKDTARAT EVTLQPLRRY DLDAAILFSD ILTIPDAMGL GLYFEAGEGP KFKHPIRQQA
DLDRLPVLDV NDSLDYVMRA VTSIRTALNG QVPLFGFSGS PWTLATYMIE GGSSKDYRYT
KGFLYSNPEF LHQLLDKLAT SVIDYLDAQV VAGAQILQIF DSWGGALGHR QFVDFSHAYN
KRIVAELKVR HPEIPVVLFT KGGGLWLDIQ ADSEADALGL DWTMPIDRAR QVLTESQRQL
TKQHKKLHSS KAIQGNLDPA TLYGSPATIR AEVNAMLDSA YANGEKTGYV ANLGHGITQW
VNPDNAKVFI DAVHDYKI
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