Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1496 |
Symbol | cumB |
ID | 3515457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1816145 |
End bp | 1816732 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637670185 |
Product | tRNA-adenosine deaminase |
Protein accession | YP_264778 |
Protein GI | 71066051 |
COG category | [F] Nucleotide transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0590] Cytosine/adenosine deaminases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00298219 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGACATT TTCTAAATAT TAATTCACAG CCTAACCAGC TAATAGATAG CCCATTTGTA AACCCGTTAA TAGGTGAGCA GCTTAAAACA GCTATATTTT GGTCAGTTGA AGATATTAAG TGGATGACAG AGGCGCTAAA GCTTGCCAAA CAAGGCGCTG AGCGTGAGGA GGTGCCAGTA GGAGCCGTAT TGGTTCATAA TCAGCAGATT ATTGGTCAAG GTTTTAATGA GCCGATCGGG CGTTGTGATG CGACAGCTCA TGCTGAAATA GTTGCCTTAA GAGAGGCTTG TGCGCATTTA AAGAATTATC GTTTGCCACT ACAGACAACT TTATATGTCA CCTTAGAGCC CTGTACCATG TGTATCGGGG CGCTGATTCA TGCTCGAGTG GACAGACTTG TATATTCTAC AAATGAACCA AGAGCAGGGA TGGTTGGCAG TCAAATGAAC TTAGCTGCAC AGCCTTTTTA TAATCATCAT ATGCAAGTCG ATACAGGTTT ATGCCGTGAG CACAGCAGTC AGATGTTAAA GGATTTTTTT CGTGAGCGTA GAAAAGCGGC AAAAGCGAAT TGCAAGATGA GCGATTAA
|
Protein sequence | MRHFLNINSQ PNQLIDSPFV NPLIGEQLKT AIFWSVEDIK WMTEALKLAK QGAEREEVPV GAVLVHNQQI IGQGFNEPIG RCDATAHAEI VALREACAHL KNYRLPLQTT LYVTLEPCTM CIGALIHARV DRLVYSTNEP RAGMVGSQMN LAAQPFYNHH MQVDTGLCRE HSSQMLKDFF RERRKAAKAN CKMSD
|
| |