| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1494 |
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| Symbol | rpsA |
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| ID | 3515455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1813226 |
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| End bp | 1814917 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637670183 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_264776 |
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| Protein GI | 71066049 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000805481 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.784704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATCAT TTGCTGAACT ATTTGAAGCG AGCATCGAAG AAACAGGTCT GGATATTGAG
CGTGGCTCGG TTATTACCGG TACTGTTGTC GCCATCGATA ACGACTGGAT CACTGTTGAT
ACTGGTCTAA AATCTGAAGG TATCGTCGCT CGTGAAGAGT TTTTAAGCGA AGAAGGCGAA
CTTGAAGTTG AAGTTGGCGA TAGTGTCGAT GTTGTGGTTG AAGCGGTTGA TAACGGTATG
GGTCAAACCT TACTGTCACG TGAAAAAGCC AAACGTGTTG AGACTTGGAA TTTCCTTGAG
AAAATCTCTG ACAATGATGA GATCGTAAAA GGTATTATCT CTAGCAAAGT AAAAGGTGGC
TTTACCGTAG ATATCGGTTC AGTACGCGCG TTCTTGCCAG GTTCTTTAGT AGATGTACGT
CCTATCCGTG ATACGACGCA TCTAGAAGGT AAAGAGTTAG AATTTAAAGT TATCAAACTT
GACCAAAAAC GTAACAACGT TGTAGTTAGT CGCCGTGCCG TTATGGAAGC TGAAAACTCA
GCTGAGCGCG AAGAGCTATT GAACAAGCTT GAAGAAGGTA TCGAGATCGA AGGTATCGTT
AAGAACCTAA CTGATTACGG CGCATTCGTT GATCTTGGTG GTATTGATGG TCTATTGCAC
ATCACTGACA TGGCATGGCG CCGTATCAAG CACCCATCTG AGGTGGTTGA AGTTGGTCAA
GACCTTAAAG TTAAAGTACT TAAGTTTGAC CGTGAGCGCA ATCGCGTAAG CTTAGGTCTA
AAACAATTGG GTACTGATCC TTGGGATAAC GTTGGCGGTA CATACCCAGT GGGTAGCGTC
GTTAAAGCTC GCGTAACTAA CTTGACTGAT TATGGTTGTT TTGCTGAAAT CTCTGAAGGT
ATCGAAGGTC TAGTACACGT ATCAGAGATG GATCATACCA ACAAAAACAT CCATCCATCA
AAAGTTGTTC AAGTGGGTGA TGAAGTTGAA GTAATGATTC TTGATATCGA TGAAGAACGT
CGTCGCATCA GCTTAGGTAT CAAACAGACT CTAGCCAATC CGTGGGATGA GTTTGATAAG
AAACATGAGC GCGGTGATAA AATCACTGGT ACCATCAAAT CAATCACTGA CTTCGGTATC
TTTATCGGTC TAGATGGCGG TATTGATGGT TTGGTTCACT TGTCAGACAT TTCTTGGAAT
GAAACTGGCG AAGATGCTAT CCGTAACTAC AACAAAGGTG ACACCGTTGA AGCAATGGTA
TTGTCTGTAG ATTCTGAAGC CAACCGTATC AGCCTAGGCG TGAAACAATT AACTTCAGAT
CCATTTAACG AATACCTAGT CAACAATGAC CGCGGTGCTA TCGTTAATGG TAAAGTAAAA
GAAGTAGACG CTAAAGGTGC TACTATCGAA CTTGCTGACG AAGTTGAAGC GTATTTACGT
GCCTCTGAGA TTCAACGTGA CCGCGTTGAA GATGCGACTA AGCATCTAAC GGTTGGTGAT
GATGTTGAAG CTAAAATCAT CAGTGTTGAT CGTAAAACAC GTAACATCAG CTTGTCAATC
AAAGCGAAAG ACGAAGCTGA AGAGCGTCAA GCGATTAAAG AGCTAAGCAG CACAACCACG
ACTACTACTG CTGCCGGTTC TGATGCACAA CCAAAAACTA TTGGTGACTT GATCAAAGAA
CAAATGCAGT AA
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| Protein sequence | MESFAELFEA SIEETGLDIE RGSVITGTVV AIDNDWITVD TGLKSEGIVA REEFLSEEGE
LEVEVGDSVD VVVEAVDNGM GQTLLSREKA KRVETWNFLE KISDNDEIVK GIISSKVKGG
FTVDIGSVRA FLPGSLVDVR PIRDTTHLEG KELEFKVIKL DQKRNNVVVS RRAVMEAENS
AEREELLNKL EEGIEIEGIV KNLTDYGAFV DLGGIDGLLH ITDMAWRRIK HPSEVVEVGQ
DLKVKVLKFD RERNRVSLGL KQLGTDPWDN VGGTYPVGSV VKARVTNLTD YGCFAEISEG
IEGLVHVSEM DHTNKNIHPS KVVQVGDEVE VMILDIDEER RRISLGIKQT LANPWDEFDK
KHERGDKITG TIKSITDFGI FIGLDGGIDG LVHLSDISWN ETGEDAIRNY NKGDTVEAMV
LSVDSEANRI SLGVKQLTSD PFNEYLVNND RGAIVNGKVK EVDAKGATIE LADEVEAYLR
ASEIQRDRVE DATKHLTVGD DVEAKIISVD RKTRNISLSI KAKDEAEERQ AIKELSSTTT
TTTAAGSDAQ PKTIGDLIKE QMQ
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