Gene Psyc_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1486 
Symbol 
ID3515447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1806524 
End bp1807225 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content41% 
IMG OID637670175 
Productoxidoreductase 
Protein accessionYP_264768 
Protein GI71066041 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.175659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.304876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGAA AAGCAATAGT AATAGGTGCA ACAGGATTGG TCGGACAACA TCTTGTGAAG 
CAGCTTAGTG AGCTTTATGA CACATTAATT GTGATTGCAC GTCGTCCTCC TCGCTATATT
AATGCCAGCA TGCGTTTCTA TCAGGTGAAT GATTTTGACA ACTTAGCCGA AATCTTTGCA
AGCGTTGGCG CTGATCGAAA AACGGATGCC TTTAGTTGCC TTGGTACTAC CAAAAAACAA
GCGGGTAGTG ATGAAGCTTT TCGTAAGATT GACCATGATT ATAATGTCGG TTTTGCCAAA
TTGTGCCAAG ATAAAGGTGT TGAAAACTTC TTTTTATTAT CCTCAATGAA TGCGGATATC
AACAGTCGCT TTTTATACAA TCGGGTAAAG GCTGAAACTG AAGAGTCGAT AATGGCATTA
GAATTTGCGC AATTGGTTAT TTTCCGTCCA TCGTTACTAC TTGGCAAGCA TAAAGGTCGC
CCGCTTGAAA GTCTGGGACA AAAAGCCTTT CAGCTTATTT CGCCACTGGT GTCCGAGTCG
CTATCCTTAC ATCCTATTTC TGCTAAGCGT GTCGCTAGTG CGATGGCGAT GAGCGCCCAT
GATATCTATC ATCGTAGTAA ATATCGCAGC GAACCTATGA TCAAAACCAC TGATATTATC
GAAAATAAAC AGATGCTTGC GATGACTCGA GTAAAATATT AA
 
Protein sequence
MQRKAIVIGA TGLVGQHLVK QLSELYDTLI VIARRPPRYI NASMRFYQVN DFDNLAEIFA 
SVGADRKTDA FSCLGTTKKQ AGSDEAFRKI DHDYNVGFAK LCQDKGVENF FLLSSMNADI
NSRFLYNRVK AETEESIMAL EFAQLVIFRP SLLLGKHKGR PLESLGQKAF QLISPLVSES
LSLHPISAKR VASAMAMSAH DIYHRSKYRS EPMIKTTDII ENKQMLAMTR VKY