Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1486 |
Symbol | |
ID | 3515447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1806524 |
End bp | 1807225 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637670175 |
Product | oxidoreductase |
Protein accession | YP_264768 |
Protein GI | 71066041 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.175659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.304876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGAA AAGCAATAGT AATAGGTGCA ACAGGATTGG TCGGACAACA TCTTGTGAAG CAGCTTAGTG AGCTTTATGA CACATTAATT GTGATTGCAC GTCGTCCTCC TCGCTATATT AATGCCAGCA TGCGTTTCTA TCAGGTGAAT GATTTTGACA ACTTAGCCGA AATCTTTGCA AGCGTTGGCG CTGATCGAAA AACGGATGCC TTTAGTTGCC TTGGTACTAC CAAAAAACAA GCGGGTAGTG ATGAAGCTTT TCGTAAGATT GACCATGATT ATAATGTCGG TTTTGCCAAA TTGTGCCAAG ATAAAGGTGT TGAAAACTTC TTTTTATTAT CCTCAATGAA TGCGGATATC AACAGTCGCT TTTTATACAA TCGGGTAAAG GCTGAAACTG AAGAGTCGAT AATGGCATTA GAATTTGCGC AATTGGTTAT TTTCCGTCCA TCGTTACTAC TTGGCAAGCA TAAAGGTCGC CCGCTTGAAA GTCTGGGACA AAAAGCCTTT CAGCTTATTT CGCCACTGGT GTCCGAGTCG CTATCCTTAC ATCCTATTTC TGCTAAGCGT GTCGCTAGTG CGATGGCGAT GAGCGCCCAT GATATCTATC ATCGTAGTAA ATATCGCAGC GAACCTATGA TCAAAACCAC TGATATTATC GAAAATAAAC AGATGCTTGC GATGACTCGA GTAAAATATT AA
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Protein sequence | MQRKAIVIGA TGLVGQHLVK QLSELYDTLI VIARRPPRYI NASMRFYQVN DFDNLAEIFA SVGADRKTDA FSCLGTTKKQ AGSDEAFRKI DHDYNVGFAK LCQDKGVENF FLLSSMNADI NSRFLYNRVK AETEESIMAL EFAQLVIFRP SLLLGKHKGR PLESLGQKAF QLISPLVSES LSLHPISAKR VASAMAMSAH DIYHRSKYRS EPMIKTTDII ENKQMLAMTR VKY
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