Gene Psyc_1483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1483 
Symbol 
ID3515444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1801251 
End bp1801682 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content45% 
IMG OID637670172 
Producthistidine triad (HIT) family protein 
Protein accessionYP_264765 
Protein GI71066038 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0478904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAAC TTCATCATAA ACTTGCTGCC GATAGTTTTT TAGTGGGCGA TTTTCCACTG 
TCGACCTGTC GTTTAATCAA TGATTGCCAA TTTCCATGGT TGATACTAGT GCCACGTGTA
TCAGGTATCA AAGAGTTGTA TGAACTGTCT GAGGCAGACC AAACGCAGTT TTTGCGTGAG
TCGAGCTGGT TATCAAGCCA ACTTGCTAAG ACCTTTCAAG CCGACAAAAT GAATGTGGCA
GCGCTCGGCA ATCAAGTACC GCAACTGCAT TTTCATCATA TTGTCCGTTA TCAGAATGAT
ATGCAGTGGC CCAATCCAGT ATGGGGCATC CCTGCGGTGC CTTATAGCAA AGAAGTGTTG
GCACAAATGC AGCAGACTTT GATGATGGCA TTGCGCGGTC ATCATCAAAT GCCATTCGAT
TGGCAGATGT AA
 
Protein sequence
MFQLHHKLAA DSFLVGDFPL STCRLINDCQ FPWLILVPRV SGIKELYELS EADQTQFLRE 
SSWLSSQLAK TFQADKMNVA ALGNQVPQLH FHHIVRYQND MQWPNPVWGI PAVPYSKEVL
AQMQQTLMMA LRGHHQMPFD WQM