| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1478 |
|---|
| Symbol | nifU |
|---|
| ID | 3515439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 1796739 |
|---|
| End bp | 1797125 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637670167 |
|---|
| Product | scaffold protein |
|---|
| Protein accession | YP_264760 |
|---|
| Protein GI | 71066033 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
|---|
| TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.671651 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00720513 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTATA GTGACCAAGT TATTGATCAT TACGAAAATC CACGCAACGT TGGCAATCTT
GATAAAAATG CCAAAAACGT CGGCACTGGC ATGGTCGGCG CACCAGCCTG TGGTGATGTC
ATGCGTTTAC AAATCCAAGT CGATGATAAC GGTATTATCG AAGATGCACG TTTTAAAACT
TATGGTTGTG GTTCAGCCAT TGCTTCAAGC TCGCTCGTTA CTGAGTGGCT AAAAGGCAAA
AGCTTGGATC AAGCTGGCGA AATTAAGAAT AGTGACATTG CTGAAGAATT GGCATTACCA
CCAGTAAAAG TGCATTGCTC TGTCCTTGCA GAAGATGCTA TCAAAGCCGC TATTAGCGAC
TATAAAGGTA AGCATATTCC TGCTTGA
|
|---|
| Protein sequence | MAYSDQVIDH YENPRNVGNL DKNAKNVGTG MVGAPACGDV MRLQIQVDDN GIIEDARFKT
YGCGSAIASS SLVTEWLKGK SLDQAGEIKN SDIAEELALP PVKVHCSVLA EDAIKAAISD
YKGKHIPA
|
|---|
| |