Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1472 |
Symbol | purH |
ID | 3515433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1788784 |
End bp | 1790364 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637670161 |
Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
Protein accession | YP_264754 |
Protein GI | 71066027 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.255919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000132318 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGTAAAG CCCCACTTGC ACTACTGTCA GTCTCCGATA AATCTAATAT CGTTGAATTC GCCCAAGGTC TGATTCAGGC AGGGTTTGGT TTGTTATCGA CTGGCGGTAC TTTCCGTTTG CTAACAGAGC ATAATGTCGC TGTCACCGAA GTATCAGATT ACACGGGTTT TCCTGAGATG ATGGATGGTC GGGTTAAAAC ACTTCATCCC AAGATCCACG GTGGCATTTT GGGACGCCGC GGTACAGATG ATATGGTGAT GAGTGAGCAT GCGATTGAAC GCATTGATTT GGTCGTTGTC AACCTCTATC CATTTGCAGA AACGATTGCA CGTAGTGACG TTACCATGAA TGATGCCATC GAAAATATCG ATATTGGCGG ACCTACTATG GTGCGTTCAG CGGCAAAGAA TCATGCACAC GTTGGTATTG TGACTGATCC AGCTGATTAT ACGCGAGTAC TTGAAGCATT AGGCGACAGT ACTGCATTGA CCGCTACCCT ACGTTACGAC CTAGCGGTTA AAGCATTTGA GCATACTGCA CAATATGACG GGATGATTGC AAACTTTTTG GGTAGCCGTG TTAATGAGAG CCAAGAGCCT GAGAGTTTTT CACGTACCTT TAACGTTCAG CTAGAAAAAG TGCAAGACCT TCGCTACGGT GAAAACCCGC ATCAAAAGGC GGCGTTCTAT GTTGAAAATA ACTCTTCAAA AAGCAAGCAA GCATCTATTG CTACTGCTAA GCAATTGCAA GGCAAAGCCT TGTCTTATAA CAATATCGCC GATACTGATG CCGCGCTTGA ATGCGTTAAA GCCTTTAGCA CGCCTGCTTG TGTGATTGTA AAGCATGCCA ACCCTTGTGG CGTTGCTGTA GATATCGATC AAGTAGCAGC ATATCGCACT GCCTTCAGTA CCGATCCTGA GTCTTCTTTT GGCGGTATCA TCGCTTTTAA CCGCCCGTTA ACCCTTGCAG CCGCTACAGC CATTATCGAC AATCAGTTTG TTGAAGTCAT TATTGCCCCA AGTGTCGAAG ACGGTGTGTT AGAGGCGACT GCTTCGAAGA AAAACGTTCG CGTCTTGGTT TGCGGCGATT TGCCAGCACC TGAGCTACGT GACCGTCAGC TTGATTATAA GCGTGTGAAT GGTGGTTTGC TGGTGCAAGA GCAAGATTTG GGCTTGATTA CGGCTCACGA CTTAAAAATC GTCACAGACG TGCAGCCAAC CGAAGCGCAG ATTGCTGATT TACTATTTAG CTGGAACGTT GCAAAATACG TTAAATCTAA TGCCATCGTT TACGCTAAAG GTCAGCGTAC CATCGGTGTA GGTGCAGGTC AGATGAGCCG TGTTAACTCA GCTCGTATCG CTGCTATTAA AGCGGAGCAC GCTGGACTTG CAACCGAAGG CGCGGTTATG GCATCTGATG CCTTCTTCCC GTTCCGTGAT GGTATCGACA ATGCAGCAGA AGTGGGTATT GCTGCGATTA TCCAACCAGG TGGTTCTATG CGCGATGATG AGACCATCGC TGCCGCAAAT GAGCACGGTA TCGCCATGGT CTTCACCGGT ATGCGTCATT TCCGTCATTA A
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Protein sequence | MSKAPLALLS VSDKSNIVEF AQGLIQAGFG LLSTGGTFRL LTEHNVAVTE VSDYTGFPEM MDGRVKTLHP KIHGGILGRR GTDDMVMSEH AIERIDLVVV NLYPFAETIA RSDVTMNDAI ENIDIGGPTM VRSAAKNHAH VGIVTDPADY TRVLEALGDS TALTATLRYD LAVKAFEHTA QYDGMIANFL GSRVNESQEP ESFSRTFNVQ LEKVQDLRYG ENPHQKAAFY VENNSSKSKQ ASIATAKQLQ GKALSYNNIA DTDAALECVK AFSTPACVIV KHANPCGVAV DIDQVAAYRT AFSTDPESSF GGIIAFNRPL TLAAATAIID NQFVEVIIAP SVEDGVLEAT ASKKNVRVLV CGDLPAPELR DRQLDYKRVN GGLLVQEQDL GLITAHDLKI VTDVQPTEAQ IADLLFSWNV AKYVKSNAIV YAKGQRTIGV GAGQMSRVNS ARIAAIKAEH AGLATEGAVM ASDAFFPFRD GIDNAAEVGI AAIIQPGGSM RDDETIAAAN EHGIAMVFTG MRHFRH
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