Gene Psyc_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1436 
Symbol 
ID3515394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1737634 
End bp1738533 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content46% 
IMG OID637670123 
ProductABC transporter, inner membrane subunit 
Protein accessionYP_264718 
Protein GI71065991 
COG category[R] General function prediction only 
COG ID[COG4120] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.641737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTAA TTGCTTTTTT TGGTGCACTT GAAAGTGGTC TGATTTATGG GCTAGTGGCG 
CTTGGCGTTC TTATCTCATT TCGTACCCTT GATTTCCCAG ATTTAACGGC TGACGGTAGT
TTTCCGTTAG GTGGCGCTGT CGCTGGTATC TCTATCATCG CTGGTATCAA TCCATGGCTT
GCCTGCGCTT TTGGTATGCT AGCAGGATCA GTCGCCGGTA TCGTCACTGC TTGGTTGCAC
GTCAAACTTG GCATTTTGCA GCTGCTTGCC AGTATCTTGG TGATGGTAGC ACTATATTCT
ATCAACCTAC GTATTATGGG TGCGCCAAAC TTACCGTTAT TGGGTGAAAC CACGGTATTT
AGCACCTTGG TGACAGATGG CAATGGCTAT TGGATGCGCT GTCTGATCAT TGGTATCGTC
GTGCTACTGG CCATGTTATT TTTAAATTGG TTTTATAGTA CCGAAACCGG TCTTTCGATG
CGTGCGACTG GCTCTAACCT GCGCATGGCA CAAGCGCAAG GTATCAATAC CTCATGGATG
ACCATCATTG GTATGGCGAT CTCTAACGGT TTGATTGCCC TAGCTGGCGC GCTATTTGTC
CAGACCCAAG GCGGCGCTGA TATCTCGATT GGTATCGGTA CAATTGTTAT TGGTTTGGCA
GCGGTCATCA TCGGTGAGAC TATTATTCCG GCTAAGCGCA TTTGGCTCAT TACCTTTGCT
GTGGTCGTCG GTGCGGTACT GTACAAGCTG TTTATTCAAG TGGCACTATC GAGCGATACA
CTACGTAGTA TTGGCTTTGG TCCGCAAGAT TTGAACTTGA TTACCGCTTT ACTCGTGGTA
TTGGCATTAA TATTGCCAAA AGCTAAAAAT AAATTCTTAA GTCGTAAAGT TCGGGCTTAA
 
Protein sequence
MSLIAFFGAL ESGLIYGLVA LGVLISFRTL DFPDLTADGS FPLGGAVAGI SIIAGINPWL 
ACAFGMLAGS VAGIVTAWLH VKLGILQLLA SILVMVALYS INLRIMGAPN LPLLGETTVF
STLVTDGNGY WMRCLIIGIV VLLAMLFLNW FYSTETGLSM RATGSNLRMA QAQGINTSWM
TIIGMAISNG LIALAGALFV QTQGGADISI GIGTIVIGLA AVIIGETIIP AKRIWLITFA
VVVGAVLYKL FIQVALSSDT LRSIGFGPQD LNLITALLVV LALILPKAKN KFLSRKVRA