Gene Psyc_1435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1435 
Symbol 
ID3515393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1736273 
End bp1737298 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content45% 
IMG OID637670122 
ProductABC transporter, substrate-binding protein 
Protein accessionYP_264717 
Protein GI71065990 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.457922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTATC AGAATCGTTT TGCCAAAGCT CTTTTATGGG GCGGTGTTTG TACCGCTATT 
TTGACTGGTT GTAATCAGCC TGCTAAAGAA GGTACCTCGA CTGATAGTAC TGCGGGTGCC
GATACCACAA CGGAAATGAA AACGGTTGCT ATCACTGCTA TCGTTGAACA TCCAGCACTT
GATGATGTAC GTAAAGGCGT GATCGATGAG CTAAACGCTG CCGGCTTTAA AGATGGCGAA
AACTTGAAAG TCAACTTTCA AAGTGCCCAA GGTAATACTG CTACCGCCGG TCAGATTGCC
AAGCAATTCG TCGCAGACAA CTCAGACGTT ATCATTGCTA TTGGCACCCC ATCTGCGCAG
TCAGTAGCTG CTGCAACCAG TAGTATTCCG TTAGTGTTTT CAGCAGTTAC CGATCCGGTT
GAAGCCAAAC TGGTATCAAA GCTTGATGGT TCTGGCACCA ACGTCACTGG TGGTTCTGAT
GCGCTTCCTT ATGAGCCACA AATCGAATTG ATGCGCCAAA TTATTCCTAG CTTAAAAAAC
GTAGGCTACG TTTATAGCCC AGGTGAAGTC AACTCAACGA TTATTCTAAA AAATCTAAAA
GAGAAACTGA CGCCACTTGG TATTAAAGTA CATGAAGCCC CTGCCCAGCG TAGTACTGAT
ATTGCCATGG CAGCACGCAG CCTAGAAGGT AAGGTCGATA TGATCTATAC CTCAACGGAC
AATAACGTGG TTTCAGCTTA CGAGTCACTA TATCAAGCCG CTAAAGAAAG TAAGATTCCA
CTACTCGCCT CTGATACCAG CTCAGTTGAA CGCGGTGCCA TCGCAGCATT AGGCGTCAAC
TACTATGATC TTGGTCGTGA AACTGGCAAA ATCGTTGTAC GCATTTTAAA TGGTGAAAAA
GCAGGCGCAA TTCCAGTATA TACGCCAAAA GTTCTTGACT TATATGTCAG TCCAAAACAC
GCTAAAGAGC AAGGCATAAC TTTACCGCAA GCCGTTATTG ATAAAGCAAA AGAAGTGGTA
GAATAA
 
Protein sequence
MLYQNRFAKA LLWGGVCTAI LTGCNQPAKE GTSTDSTAGA DTTTEMKTVA ITAIVEHPAL 
DDVRKGVIDE LNAAGFKDGE NLKVNFQSAQ GNTATAGQIA KQFVADNSDV IIAIGTPSAQ
SVAAATSSIP LVFSAVTDPV EAKLVSKLDG SGTNVTGGSD ALPYEPQIEL MRQIIPSLKN
VGYVYSPGEV NSTIILKNLK EKLTPLGIKV HEAPAQRSTD IAMAARSLEG KVDMIYTSTD
NNVVSAYESL YQAAKESKIP LLASDTSSVE RGAIAALGVN YYDLGRETGK IVVRILNGEK
AGAIPVYTPK VLDLYVSPKH AKEQGITLPQ AVIDKAKEVV E