| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1432 |
|---|
| Symbol | metG |
|---|
| ID | 3515390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 1731996 |
|---|
| End bp | 1734098 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637670119 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_264714 |
|---|
| Protein GI | 71065987 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.111821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.539533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGC GTGAGATTCT AGTAACCAGT GCCCTGCCCT ACGCCAATGG TGACATCCAT
TTGGGGCATC TTGTAGAGTA TATTCAAACT GATATTTGGG TGCGATCGAT GAAGGCGCAA
GGTCATAAGG TGACTTATGT CTGCGCGGAT GATGCTCATG GTACTGCCAT CATGCTCAAA
GCCGAAGACA ATGGCGTGAC GCCAGAACAG CAAATTGCCA ATGTACAAGC CGCTCATGAA
GCCGATTTTG CTAAATTTTT GATTAATTTT GATAACTATC ATTCAACGCA TTCAGAAGAG
AATCGGGAAT TCTCCGAGCT GATTTATCGT CGCCTAAGAG ACACGGGGCA TATCTCTACT
CGTGATGTTG AGCAGTTATT TGACCCTGAA AAACAGTTGT TTTTAGCAGA CCGTTTTGTC
AAAGGCACTT GCCCTGAATG TGCTGCGCCC GACCAATATG GCGATAACTG TGAAGTCTGT
GGCACCACTT ATGACGCGAC AGAGCTCAAA GATCCGTACT CTACATTATC AAATGCGACG
CCTATTCTAA AAACCTCAAA GCATTATTTC TTTGACTTAC CAGAGTTCGA GCAATTTTTA
AAAGATTGGA CGCGCAGTGA TAATCGCTTG CAAGTTTCAG TTGCCAATAA ACTGCAAGAA
TGGTTTGATG CCGGTTTGAC CAGTTGGGAT ATCTCACGCG ATGCGCCCTA TTTTGGTTTT
CAAATTCCAG ATACGCCAAG CGATGAGCCC GATAAATACT TTTATGTGTG GCTAGATGCG
CCTGTCGGTT ACATGGCAAG CTTTAAGAAC TTGTGCGACA AGCGTGCTGG TACCGATGAT
GCGTTAGATT TTGACCATTA TTGGGCGCAA GAAAACGAGC ATAAAACTGA AGTTTATCAC
TTCATTGGCA AAGATATTGT TTACTTCCAT GCGCTATTTT GGCCTGCGAT GCTTGCCGGT
AGCGAACTCC GTACACCAAC AGCTGTCTTT GCTCATGGCT TCCTAATGGT CAATGGCGAA
AAAATGAGTA AGTCGCGCGG CACCTTTATT AAAGCCGACA CTTACGCTGA GCATTTACAT
CCTGAATATC TGCGCTATTA TTTCGCCAGC AAATTGTCTG ACAAAGTCGA AGACATCAAC
CTAGATTTAG AAGACTTTAT GCAAAAGGTC AATTCTGACC TCGTTGGTAA AGTGGTCAAT
ATCGCCAGTC GCAGCGCTGG TTTTTTGCTC AAAAAATATG ACGGCATGCT CACAGACGTC
TGTGCTGAGC CAAGCTTATT AGAAGATATC ACCAAGACTG GTGATGAGAT TGCTGCCGCT
TACGAGAACC GTGAGTTTTC ACGTGCTATG CGTCTGATTA TGCAATGTGC TGATAAAGCC
AATGAATATA TTGATGAGAA AAAACCATGG GCGCTTGCCA AGGTTGAAGG CGCAGAGCAA
GAAGTACAAG ATGTCTGCTC AGTGGCAATC AATATCTTCC GTCAATTGAT GGTATATCTT
GCCCCTGTCT TGCCTGAGCT GACTGCCAAT GCCAAAGAAT TTTTAAATAT TAATGATTTA
AGCTTTGCTA GCAGAAATGA GTGGTTGCTT GGTCATCAAA TTAATAAGTT TAAGCCGCTT
ATGCAGCGTA TTGATGAAAA AGATGTTGCT GCAATGGTTG ATGCATCAAA AGCCTCATTG
ACACAAGTAG ATGCGCCTAC CGCTAGCCAA GACGATAAAA TGGTAGCAAA AAACACCGCG
CCCGCAGCAA CGCCGAGCAG TACTGAACAA GCAGACTATA TCGGTATTGA AGACTTTGCC
AAAGTTGAGA TGAAAGTGGC TCATGTTATC GCTTGCAGTT ATGTTGAAGG CGCGGACAAA
TTGCTTCAGT TCACCTTAGA TGTGGGTGAA GCGCAGCCGC GTAATGTCTT TAGCGGTATT
CGTAAGTTTT ATGAGCCTGA GCAATTGCTA GATAAAAAGG TCATTTGCGT GACCAATCTG
GCACCGCGTA AGATGAAATT TGGTATATCG GAAGGCATGA TTCTGTCTTC AGGCGATCCA
AAAACCCAGT TAACGGTGGT TACTTTACCG GACAACTGCG TGATTGGAGA TTTGCTTGCC
TAA
|
|---|
| Protein sequence | MKVREILVTS ALPYANGDIH LGHLVEYIQT DIWVRSMKAQ GHKVTYVCAD DAHGTAIMLK
AEDNGVTPEQ QIANVQAAHE ADFAKFLINF DNYHSTHSEE NREFSELIYR RLRDTGHIST
RDVEQLFDPE KQLFLADRFV KGTCPECAAP DQYGDNCEVC GTTYDATELK DPYSTLSNAT
PILKTSKHYF FDLPEFEQFL KDWTRSDNRL QVSVANKLQE WFDAGLTSWD ISRDAPYFGF
QIPDTPSDEP DKYFYVWLDA PVGYMASFKN LCDKRAGTDD ALDFDHYWAQ ENEHKTEVYH
FIGKDIVYFH ALFWPAMLAG SELRTPTAVF AHGFLMVNGE KMSKSRGTFI KADTYAEHLH
PEYLRYYFAS KLSDKVEDIN LDLEDFMQKV NSDLVGKVVN IASRSAGFLL KKYDGMLTDV
CAEPSLLEDI TKTGDEIAAA YENREFSRAM RLIMQCADKA NEYIDEKKPW ALAKVEGAEQ
EVQDVCSVAI NIFRQLMVYL APVLPELTAN AKEFLNINDL SFASRNEWLL GHQINKFKPL
MQRIDEKDVA AMVDASKASL TQVDAPTASQ DDKMVAKNTA PAATPSSTEQ ADYIGIEDFA
KVEMKVAHVI ACSYVEGADK LLQFTLDVGE AQPRNVFSGI RKFYEPEQLL DKKVICVTNL
APRKMKFGIS EGMILSSGDP KTQLTVVTLP DNCVIGDLLA
|
|---|
| |