| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1430 |
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| Symbol | lpsI |
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| ID | 3515388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1729295 |
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| End bp | 1730008 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637670117 |
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| Product | coenzyme A transferase |
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| Protein accession | YP_264712 |
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| Protein GI | 71065985 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.920311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.272732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCAAT CAAAAGTGTA TGACAGCGCA GAAGCGGCGC TGAGCGGTGT TGTGCGTGAC
GGACAAACGC TAGCCATCGG TGGTTTTGGT CTATGCGGTA TTCCTGAAGC ATTGATTGAA
GCGCTGCGTG ATAGTGAGGT TAAAGATTTG ACCTGTATCA GTAATAACGC TGGCGTTGAC
GACTTTGGTT TAGGGTTGTT GTTACAAACG CGTCAGATTA AAAAAATGAT CTCATCTTAT
GTGGGTGAAA ATAAAGAGTT TGAGCGCCAA TACTTAGCAG GCGAGTTAGA AGTTGAACTG
ACTCCGCAAG GTACACTAGC AGAAAAGCTA CGTTCAGGCG GTGCAGGTAT TCCGGCATTT
TACACGGCAA CTGGCGTCGG CACCTTAGTT GCTGAAGGCA AAGAGACGCG TGATTTTAAT
GGGCGCACTT ATGTGCTTGA GCATTCATTG CGTGCTGATG TGTCATTAAT TAAAGCGCAA
AAAGCGGATA AAGCAGGCAA CTTAATCTTT AATAAAACCG CTCGTAATTT TAATCCAGAC
TGTGCGATGG CAGGCAAGAT TACCATTGTT GAAGTTGAAG AAATTGTAGA AACAGGCATT
TTAAATCCTG ATGAGATTCA TCTGCCAGGT ATCTTTGTAC AGCGTATCGT ATTGAACCGC
AATCCTGAAA AACGTATCGA AAAAACCACG ACTAAAGCTG TCGAAGGCGC TTAG
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| Protein sequence | MSQSKVYDSA EAALSGVVRD GQTLAIGGFG LCGIPEALIE ALRDSEVKDL TCISNNAGVD
DFGLGLLLQT RQIKKMISSY VGENKEFERQ YLAGELEVEL TPQGTLAEKL RSGGAGIPAF
YTATGVGTLV AEGKETRDFN GRTYVLEHSL RADVSLIKAQ KADKAGNLIF NKTARNFNPD
CAMAGKITIV EVEEIVETGI LNPDEIHLPG IFVQRIVLNR NPEKRIEKTT TKAVEGA
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