| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1429 |
|---|
| Symbol | |
|---|
| ID | 3515387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1728589 |
|---|
| End bp | 1729218 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637670116 |
|---|
| Product | butyryl-CoA:acetate CoA transferase |
|---|
| Protein accession | YP_264711 |
|---|
| Protein GI | 71065984 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
|---|
| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.164203 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATGGA CAAGAGAGCA GATGGCACAG CGTGCCGCAC AAGAGTTACA AAACGGTTAT
TATGTCAACT TAGGCATTGG TCTACCGACG CTCGTTGCAA ACTATATCCC TAAAGATGTC
GATGTTTGGC TACAGTCAGA GAATGGCTTA TTAGGTATTG GCGAGTTTCC TACTGCAGAA
AACGTCGATG CAGATTTGAT TAATGCGGGT AAACAGACGG TCACTGCCGA GTCAGGCGCC
AGTTATTTTA GTAGCTCAGA GTCGTTTGCG ATGATTCGTG GCGGTCATGT CAACCTTGCG
ATATTGGGTG CGATGGAAGT CTCAGAGCAG GGCGATTTGG CAAATTGGAT GATTCCGAAA
AAGATGGTCA AAGGCATGGG CGGCGCGATG GATTTGGTCG CAGGCGTGCA GCGCGTGATT
GTTTTGATGG AGCAGGTCAA CAAACACGGC GAGCCAAAAA TCCTTGCCAA TTGCGAGTTG
CCACTGACGG GTAAAGGGGT CGTTGATCGC ATCATCACAG AGCTTGCCGT ACTCGATGTG
ACTGACAACG GTCTAAAATT GGTTGAGCTA GCAGAGGGTG TTAGCTTTGA TGAGTTACAA
GAGAAAACCC CAGTGACCAT TATCCAATAA
|
|---|
| Protein sequence | MAWTREQMAQ RAAQELQNGY YVNLGIGLPT LVANYIPKDV DVWLQSENGL LGIGEFPTAE
NVDADLINAG KQTVTAESGA SYFSSSESFA MIRGGHVNLA ILGAMEVSEQ GDLANWMIPK
KMVKGMGGAM DLVAGVQRVI VLMEQVNKHG EPKILANCEL PLTGKGVVDR IITELAVLDV
TDNGLKLVEL AEGVSFDELQ EKTPVTIIQ
|
|---|
| |