Gene Psyc_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1422 
Symbol 
ID3515380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1721891 
End bp1722604 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content44% 
IMG OID637670109 
Productubiquinol cytochrome c1 reductase 
Protein accessionYP_264704 
Protein GI71065977 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00068249 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.213297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC TAATTAAATC CCTAGCAGGT TTGGGCTTAG GCGCGGCATT AACTTTGACT 
GCTGGTAGCG CTCTAGCGTC AGGTAGTGGC TGCGGTACGT TTACCAATGC TGAGGGTGTT
GAAGAACATC TAGCTTGTAG CACAGCTCCT ATTGATTTTA CCAATAAGGG TTCATTACAA
AACGGTGCTA AAACGTTTAT GAATTACTGC GCTGGCTGCC ATTCAGCAAA GTACGTTCGT
CATTCGCGCA TTGCCAAAGA CCTAGAAATA CCGCCTGAAT TGGTTGAAAA GTATCTGATG
GTCACCACCG ATCAAATTGG TGAGCATATC AATGCTGAGA TTGACCCTGA GATTCAAGCG
TCTTGGTTTG GCGCAGCGCC TCCGGATCTG TCACTTGAAA CAAGACTGCG CGGCGATGAT
TGGGTTTACA CTTACCTCTT GTCTTTCTAT GAAGATCCAA GCCGTCCTTG GGGTGCTAAC
AACTTAGTGC TACACAACGC GGCAATGCCT CATGTCTTGC ATAACATGCA AGAAGAGCTG
AGTCAGGAAG AGTTTGAATC TGAAGTAGGC GACTTGGTTA ACTTTATGGC ATGGATGGCT
GAGCCTATTC GTCATGACCG TAAAGTCATT GGTTTCTTTG TGATTTTATT CTTACTTGTC
TTATTGATTC CAGTTTACTT GCTCAATAAA GAATTCTGGA AAGATATCAA ATAA
 
Protein sequence
MSTLIKSLAG LGLGAALTLT AGSALASGSG CGTFTNAEGV EEHLACSTAP IDFTNKGSLQ 
NGAKTFMNYC AGCHSAKYVR HSRIAKDLEI PPELVEKYLM VTTDQIGEHI NAEIDPEIQA
SWFGAAPPDL SLETRLRGDD WVYTYLLSFY EDPSRPWGAN NLVLHNAAMP HVLHNMQEEL
SQEEFESEVG DLVNFMAWMA EPIRHDRKVI GFFVILFLLV LLIPVYLLNK EFWKDIK