Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1420 |
Symbol | |
ID | 3515378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1720079 |
End bp | 1720663 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637670107 |
Product | putative ubiquinol-cytochrome c reductase, iron-sulfur subunit |
Protein accession | YP_264702 |
Protein GI | 71065975 |
COG category | [C] Energy production and conversion |
COG ID | [COG0723] Rieske Fe-S protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000000280534 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.115712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCATG CCGAAGGCGT TAACGTACAA CGCCGTAGAG TTCTTATTGC CTCGACTGCC GTAATTGGTG CAGCTGGGGT AGCTGCTGTG GCAACACCTT TTGTCCGCTC TTGGACCCCA AGCGCTAAAG CTGAGGCTGC CGGTGCGGCA GTGACCCAAG ATATTGGTTC TATCGAAGCA GGACAAATGA TTGTCATCAA ATATCGTGGC AAACCTATCT TTGTGGTTAA GCGTACTGAA GAGATGCTGA CGTTGCTTGA GTCAGTAAAG CCATTATTGT CTGACCCTGA TTCTGATGCC TCTTTGCAAC CTGAGTACTG TAAAAATCCT GAACGCTCTA TCTCGCCAGA AATATTGGTG GTAGAAGGCG TCTGTACGCA TTTGGGCTGT GCACCAAACT ACCGTCCTGA TGTTGGCGCA GCCGATTTAG GTGGTAATGA CTGGTATGGC GGTTTTTTCT GCCCCTGTCA TGGCTCTAAA TACGATTTAG CGGGTCGCGT TTATAGTGGT GTACCTGCAC CGCTCAACTT ACCTGTCCCA GATTACAACA TGGATGGTAC CATCTTGACG ATTGGGGAGG CTTAA
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Protein sequence | MSHAEGVNVQ RRRVLIASTA VIGAAGVAAV ATPFVRSWTP SAKAEAAGAA VTQDIGSIEA GQMIVIKYRG KPIFVVKRTE EMLTLLESVK PLLSDPDSDA SLQPEYCKNP ERSISPEILV VEGVCTHLGC APNYRPDVGA ADLGGNDWYG GFFCPCHGSK YDLAGRVYSG VPAPLNLPVP DYNMDGTILT IGEA
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