Gene Psyc_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1420 
Symbol 
ID3515378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1720079 
End bp1720663 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content49% 
IMG OID637670107 
Productputative ubiquinol-cytochrome c reductase, iron-sulfur subunit 
Protein accessionYP_264702 
Protein GI71065975 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000280534 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.115712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATG CCGAAGGCGT TAACGTACAA CGCCGTAGAG TTCTTATTGC CTCGACTGCC 
GTAATTGGTG CAGCTGGGGT AGCTGCTGTG GCAACACCTT TTGTCCGCTC TTGGACCCCA
AGCGCTAAAG CTGAGGCTGC CGGTGCGGCA GTGACCCAAG ATATTGGTTC TATCGAAGCA
GGACAAATGA TTGTCATCAA ATATCGTGGC AAACCTATCT TTGTGGTTAA GCGTACTGAA
GAGATGCTGA CGTTGCTTGA GTCAGTAAAG CCATTATTGT CTGACCCTGA TTCTGATGCC
TCTTTGCAAC CTGAGTACTG TAAAAATCCT GAACGCTCTA TCTCGCCAGA AATATTGGTG
GTAGAAGGCG TCTGTACGCA TTTGGGCTGT GCACCAAACT ACCGTCCTGA TGTTGGCGCA
GCCGATTTAG GTGGTAATGA CTGGTATGGC GGTTTTTTCT GCCCCTGTCA TGGCTCTAAA
TACGATTTAG CGGGTCGCGT TTATAGTGGT GTACCTGCAC CGCTCAACTT ACCTGTCCCA
GATTACAACA TGGATGGTAC CATCTTGACG ATTGGGGAGG CTTAA
 
Protein sequence
MSHAEGVNVQ RRRVLIASTA VIGAAGVAAV ATPFVRSWTP SAKAEAAGAA VTQDIGSIEA 
GQMIVIKYRG KPIFVVKRTE EMLTLLESVK PLLSDPDSDA SLQPEYCKNP ERSISPEILV
VEGVCTHLGC APNYRPDVGA ADLGGNDWYG GFFCPCHGSK YDLAGRVYSG VPAPLNLPVP
DYNMDGTILT IGEA