| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1413 |
|---|
| Symbol | leuC |
|---|
| ID | 3515371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1709516 |
|---|
| End bp | 1710934 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637670100 |
|---|
| Product | isopropylmalate isomerase large subunit |
|---|
| Protein accession | YP_264695 |
|---|
| Protein GI | 71065968 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
|---|
| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.634332 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGTC AAACGTTATA TGACAAACTT TGGAATGCTC ACGAAGTCAC CAAGCGTGAT
GATGGTTCGA GCCTGATTTA CATCGACCGT CATTTGCTAC ACGAAGTGAC AAGCCCACAA
GCATTTGAAG GTTTAGAGCT GGCGAATAGA GCGCCGTGGC GTCTATCTGC TAATATTGCA
AGTCCTGACC ACAATGTACC TACAGTCACT AAAGAGCGCT CAGAAGGCGT GGCAGGTATT
AAGGATAAGG TCTCGCGTTT ACAAGTATTG ACGTTAGATA ATAACTGTGC CAAATTTGAT
ATAGCTGAAT TTACGATTAA TGATGCGCGT CAAGGTATCT TGCATGTCGT CGGTCCTGAG
CAAGGCTTGG TGTTGCCTGG TATGACCGTT GTTTGCGGTG ATTCACATAC CGCCACTCAT
GGCGCACTTG GCTGCTTAGC GCATGGTATC GGCACCTCTG AGGTTGAGCA TGTATTGGCA
ACCCAGTGTT TGATTCAGAA AAAATCAAAA AATATGCAAA TCCGTGTCAC GGGTGAGCTT
GGCGTTGGCG TGACTTCAAA AGACGTCGTA CTGGCTATCA TTGCAAAAAT TGGTACCGCT
GGTGGGACAG GGCATGCTAT TGAATTTGCA GGTCAAGTCT TTGAAGATAT GAGCATGGAA
GGTCGCATGA CCGTCTGTAA TATGGCGATT GAAGCAGGCG CGCGCGTTGG TATGGTTGCG
GTCGATGATA CGACTATTAA CTATGTCAAA GGTCGTCCTT ATGCACCGAA CGAGTCGCAA
TGGCAGCAAG CAGAAGCTTA CTGGCGTACT TTTTATTCAG ATGATGACGC TGTATTTGAT
AGCGTGGTTG AGATTGATGG CAGTCAAATT GCGCCGCAAG TCTCTTGGGG TACGTCGCCT
GAAATGGTGG TTGATGTCAC ACAGTCTGTT CCAACACTGG ATCAAGCCAT TGATGAGGCA
CAAGAAGAAG GTTGGTTGCG TGCTTATACT TATATGGGTT TGGAAGCGGG TCAAAAAATT
ACCGATATCC AGCTGGACCG TATCTTTATT GGCTCTTGTA CCAACTCGCG TATCGAAGAT
TTACGTGATG CTGCCGCCGT GATTAAAGGT CGTAAAGTTG CTGATAATAT CAAAGAAGCG
ATCGTCGTTG CTGGCTCTGG ACAAGTGAAG TTGCAGGCGG AAGCAGAAGG CTTAGATGCT
TTGTTTACGG ATGCAGGTTT TGAATGGCGT GAGCCTGGCT GCTCGATGTG CCTTGCGATG
AATGCTGATA AGCTTGAGCC ACAAGAGCAT TGCGCTTCGA CCTCTAACCG TAACTTTGAA
GGTCGTCAAG GTAATGGTGG TCGTACGCAT TTGGTCAGTC CAGCTATGGC AGCGGCAGCA
GCATTGGCAG GTCACTTTGT GGATGTGCGA ACCTTTTAG
|
|---|
| Protein sequence | MAGQTLYDKL WNAHEVTKRD DGSSLIYIDR HLLHEVTSPQ AFEGLELANR APWRLSANIA
SPDHNVPTVT KERSEGVAGI KDKVSRLQVL TLDNNCAKFD IAEFTINDAR QGILHVVGPE
QGLVLPGMTV VCGDSHTATH GALGCLAHGI GTSEVEHVLA TQCLIQKKSK NMQIRVTGEL
GVGVTSKDVV LAIIAKIGTA GGTGHAIEFA GQVFEDMSME GRMTVCNMAI EAGARVGMVA
VDDTTINYVK GRPYAPNESQ WQQAEAYWRT FYSDDDAVFD SVVEIDGSQI APQVSWGTSP
EMVVDVTQSV PTLDQAIDEA QEEGWLRAYT YMGLEAGQKI TDIQLDRIFI GSCTNSRIED
LRDAAAVIKG RKVADNIKEA IVVAGSGQVK LQAEAEGLDA LFTDAGFEWR EPGCSMCLAM
NADKLEPQEH CASTSNRNFE GRQGNGGRTH LVSPAMAAAA ALAGHFVDVR TF
|
|---|
| |