Gene Psyc_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1400 
Symbol 
ID3515358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1694062 
End bp1695123 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content47% 
IMG OID637670087 
ProductCoA-transferase family III protein 
Protein accessionYP_264682 
Protein GI71065955 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.244343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATA TACTAATGAA TCAAATGGCT GATTGTCTTC AAGGTATTAA AGTAGTAGAT 
CTAACCCGCA ATTTACCTGG TCCATTTGCG ACCAGGCTCC TTGCGGACCT TGGTGCCGAA
ATTGTTAAGA TTGAACCGCT TAATGGTGAC CCTGCTCGTG CCTTTGGCGA GATATTCACC
GCGTTGAACC ACGGTAAAGA AACTCAAAAA ATTGACTTTC GTGATCCAGT AGGTATTGAG
ACAATCAAAA CGCATCTTAA AGATGCCGAC GTGATGCTCG ATAGCTTTCG GCCTGAAGTA
TTAGAAGGTA TGGGACTTGC CGCCGAAACC CTGCATGCTA TCAATCCAAA GCTAGTCATG
GTATCGATTA CTGGTTATGG CGTGGCTGAT GGCGAGACCG TTACCCATGA CTGGAGCCAG
AAAGCCGGTC ATGACATCAA CTTTATGGCG ATGAGCGGCG TGCTCGATCA GTTGAAAACG
GCAGAGGGCG ATCAGGCAAT GCCTAATATC CAGTTTGCAG ATTTGGCAGG TGGTAGTGAT
ACGGCAGTGA TTGCCCTTTT GGCCGCCGTG TTTTCAGCAC AGCGTACTGG CAAAGGCCGT
CACGTTGCAG TCAGTATGAC CCACAGCTTG TATCAGCATA TGGTCATGCC AAAGGCGACC
GGAAAACTGG TCAAAAGCTT TTCTGGCAAA AATCCAAAGC CGCAACATGA CTTTTTAGGT
GGCTTACTAC CCTGCTATCG TTTATACAAA ACATTCGATG AGCGTCATAT AGCAGTCGGC
TCCTTAGAGT TGAAGTTTTG GCAAGGGTTA TGTGAGGTAT TAGAATTGCC TGAGCTCAAA
ACTAAGCACT GGCAAATGGG CGTAATGCCC AATACTAAAG ACAGTCAAGA AGCAGCGCAA
ACGGTTGCTG ACAAGTTTGC CAGCCACGAC CTTTCTTACT GGCAGCAGGT GTTTGAAACA
GCCGATGTTT GCGTCACCCC AGTACTAACA CTAGAAGAAG CTCGCGCGCA CCCTTTATTT
GCACACCAAG ATGAGCATAG TGCCACATTA GGCTGGCAAT AA
 
Protein sequence
MSNILMNQMA DCLQGIKVVD LTRNLPGPFA TRLLADLGAE IVKIEPLNGD PARAFGEIFT 
ALNHGKETQK IDFRDPVGIE TIKTHLKDAD VMLDSFRPEV LEGMGLAAET LHAINPKLVM
VSITGYGVAD GETVTHDWSQ KAGHDINFMA MSGVLDQLKT AEGDQAMPNI QFADLAGGSD
TAVIALLAAV FSAQRTGKGR HVAVSMTHSL YQHMVMPKAT GKLVKSFSGK NPKPQHDFLG
GLLPCYRLYK TFDERHIAVG SLELKFWQGL CEVLELPELK TKHWQMGVMP NTKDSQEAAQ
TVADKFASHD LSYWQQVFET ADVCVTPVLT LEEARAHPLF AHQDEHSATL GWQ