Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1400 |
Symbol | |
ID | 3515358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1694062 |
End bp | 1695123 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637670087 |
Product | CoA-transferase family III protein |
Protein accession | YP_264682 |
Protein GI | 71065955 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.244343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATA TACTAATGAA TCAAATGGCT GATTGTCTTC AAGGTATTAA AGTAGTAGAT CTAACCCGCA ATTTACCTGG TCCATTTGCG ACCAGGCTCC TTGCGGACCT TGGTGCCGAA ATTGTTAAGA TTGAACCGCT TAATGGTGAC CCTGCTCGTG CCTTTGGCGA GATATTCACC GCGTTGAACC ACGGTAAAGA AACTCAAAAA ATTGACTTTC GTGATCCAGT AGGTATTGAG ACAATCAAAA CGCATCTTAA AGATGCCGAC GTGATGCTCG ATAGCTTTCG GCCTGAAGTA TTAGAAGGTA TGGGACTTGC CGCCGAAACC CTGCATGCTA TCAATCCAAA GCTAGTCATG GTATCGATTA CTGGTTATGG CGTGGCTGAT GGCGAGACCG TTACCCATGA CTGGAGCCAG AAAGCCGGTC ATGACATCAA CTTTATGGCG ATGAGCGGCG TGCTCGATCA GTTGAAAACG GCAGAGGGCG ATCAGGCAAT GCCTAATATC CAGTTTGCAG ATTTGGCAGG TGGTAGTGAT ACGGCAGTGA TTGCCCTTTT GGCCGCCGTG TTTTCAGCAC AGCGTACTGG CAAAGGCCGT CACGTTGCAG TCAGTATGAC CCACAGCTTG TATCAGCATA TGGTCATGCC AAAGGCGACC GGAAAACTGG TCAAAAGCTT TTCTGGCAAA AATCCAAAGC CGCAACATGA CTTTTTAGGT GGCTTACTAC CCTGCTATCG TTTATACAAA ACATTCGATG AGCGTCATAT AGCAGTCGGC TCCTTAGAGT TGAAGTTTTG GCAAGGGTTA TGTGAGGTAT TAGAATTGCC TGAGCTCAAA ACTAAGCACT GGCAAATGGG CGTAATGCCC AATACTAAAG ACAGTCAAGA AGCAGCGCAA ACGGTTGCTG ACAAGTTTGC CAGCCACGAC CTTTCTTACT GGCAGCAGGT GTTTGAAACA GCCGATGTTT GCGTCACCCC AGTACTAACA CTAGAAGAAG CTCGCGCGCA CCCTTTATTT GCACACCAAG ATGAGCATAG TGCCACATTA GGCTGGCAAT AA
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Protein sequence | MSNILMNQMA DCLQGIKVVD LTRNLPGPFA TRLLADLGAE IVKIEPLNGD PARAFGEIFT ALNHGKETQK IDFRDPVGIE TIKTHLKDAD VMLDSFRPEV LEGMGLAAET LHAINPKLVM VSITGYGVAD GETVTHDWSQ KAGHDINFMA MSGVLDQLKT AEGDQAMPNI QFADLAGGSD TAVIALLAAV FSAQRTGKGR HVAVSMTHSL YQHMVMPKAT GKLVKSFSGK NPKPQHDFLG GLLPCYRLYK TFDERHIAVG SLELKFWQGL CEVLELPELK TKHWQMGVMP NTKDSQEAAQ TVADKFASHD LSYWQQVFET ADVCVTPVLT LEEARAHPLF AHQDEHSATL GWQ
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