| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1396 |
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| Symbol | |
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| ID | 3515354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1688186 |
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| End bp | 1688881 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637670083 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_264678 |
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| Protein GI | 71065951 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.430532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.787834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCTCTA TCTACTCAGC TCCGATTCTC GTATTCGATG TCAATGAAAC GCTCCTAGAT
ATCGATACGC TCACGCCCTT ATTCACGCGA TTATTTGGGG ACGAAAATAG ACTCAGAGAG
TGGTTCGCGC AATTGGTACT TTATTCGCAA ACCATGACTT TATCTGGTCT TTACACGCCT
TTTGGCGAGC TTGGCGTTGG TGCCTTGCAA ATGACCGCAG ATATTCATGC CGTTACGCTA
ACAGAAGAAG ATATACAGGA GTTTAAGCAG CGCATGAGTG AGACGCCAGC TCACCCTGAC
GTTATCCCTG CTTTGACTAA ACTGCGTGAT GCAGGATTTA GATTGGTGAC CTTGACCAAC
TCAGCCCCCA GCACCTCTCC GACACGGCTT GAAAAAGCAG GACTGAGTGA ATTCTTTGAG
CAGAATTTCA GTGTTGACAG TGTCCGTCAA TTTAAACCTG CACCGGCAAT ATATCAGATG
GTCGCCAGCG AGCTGTCCGT TGAGACCTCA GAGCTATGTC TTGTAGCCTG TCATATCTGG
GATACCATCG GTGCTCAAGC TGCTGGCTGC CAAGGAGCTT TTGTAACCCG ACCTTATAAT
GCGCTACTTT CGGCACCCAA CGTACCAAAA CCCGACTTCA TCGCTTCAGA CCTCATCACC
CTTGCTGAAC ACATTATTAA TCATCAAAGC TCTTAG
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| Protein sequence | MSSIYSAPIL VFDVNETLLD IDTLTPLFTR LFGDENRLRE WFAQLVLYSQ TMTLSGLYTP
FGELGVGALQ MTADIHAVTL TEEDIQEFKQ RMSETPAHPD VIPALTKLRD AGFRLVTLTN
SAPSTSPTRL EKAGLSEFFE QNFSVDSVRQ FKPAPAIYQM VASELSVETS ELCLVACHIW
DTIGAQAAGC QGAFVTRPYN ALLSAPNVPK PDFIASDLIT LAEHIINHQS S
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