| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1395 |
|---|
| Symbol | |
|---|
| ID | 3515353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1687382 |
|---|
| End bp | 1687990 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637670082 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_264677 |
|---|
| Protein GI | 71065950 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0418723 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.76235 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGTA CTACATTATA TAATCGTCAT GAAGCATTAG AGCGAGCCAT GCAGCTATTT
TGGCAAAAAG GCTTTCATGC GACGTCTTTA AAGGATATCG AGCAAGCGCT TGATATGCGA
CCAGGCAGTA TTTATGCCGC TTTCGGTAAT AAGGATGGAC TGTTTCAAGA AGCGCTCGAT
TACTATGCTC AGGCAGAACT AAAGGAGTTT GAGCGTATAT TGAGCAGCTA TGAGTCCCCT
TTGTTAGGAT TGGCGGCTTA CGTGCGTCAA CTTGGCGGTA TCCGCGAAAA AAACTTGCCC
AGTCAGGTGT GTATGCTGGT CAAAAGCTTA CTTGAGCTTG GTGCTCGTGA GCAGCCAGCA
CTTGAAAAGG TCGAGAAGCT ATTAGCTGGC ATGGAAATGC GCTTTGTAGA GTGCTTTGCT
CAAGCCCAGC GGTTGGGTGA GTTGGATGAT CAGCTGGATG CTGTCAGGCT TGGACGGCGC
TTGCAGGCAG AAGTTATGGG CATACGCGCT TTTGCTCAGC GTGATGCCGA TAGCGTGGCG
GTGCAGGCAA TTGCAGATGA TATAGCGTCT TCTATAGAGG CGATGCGTAA GGGTGTGTCT
GCTGGTTAG
|
|---|
| Protein sequence | MSRTTLYNRH EALERAMQLF WQKGFHATSL KDIEQALDMR PGSIYAAFGN KDGLFQEALD
YYAQAELKEF ERILSSYESP LLGLAAYVRQ LGGIREKNLP SQVCMLVKSL LELGAREQPA
LEKVEKLLAG MEMRFVECFA QAQRLGELDD QLDAVRLGRR LQAEVMGIRA FAQRDADSVA
VQAIADDIAS SIEAMRKGVS AG
|
|---|
| |