| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1370 |
|---|
| Symbol | |
|---|
| ID | 3515328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 1653540 |
|---|
| End bp | 1654811 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637670057 |
|---|
| Product | phage integrase |
|---|
| Protein accession | YP_264652 |
|---|
| Protein GI | 71065925 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000628694 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTA AACTTACCAA AAAACTTATT GATTCAGTAG ACTATACCGC TAAAGGTACT
GAAATCTATA TGGATGATGT ATTAACTGGT TTTGCGCTAC GCATAGGCAG GCAATCAAAG
CGCTATACAT TGCATAAGCG CATCAATGGA AAGCTGTATA GAGATGAAGT AGAAGAGACA
CATCTAATTA CGCTAACTGA AGCACGTGAA AAAGCCAGCA TAATGATGGC AAACATAAAA
AAAGGTATGC ATGTTTACGA TGGTCTTCAC GAGAACTTAG AAGATCCGAA AAATAAGACC
AATAATGTGC CAACACTGCA AGAAGCTTAT GACTACTTTA AATCAACGAA GACTGGCTTA
GCTAAAGGCA CTATTACCAC TTATGACCGT CAAATAATAC ATAAGCTGAA AGACTGGCTA
AATATCTCAC TAAATGATAT TACTAAGTCA ATGATAAGTG ATAAACATAA GGAAATAAGC
AAGAATAGCG AAGCTCAGGC TAATGCAACT ATGAGAGCTC TGAGATCAGT TTGGAATTAT
TGCCGTGATA GCTTTTTAGG TGATGACGAA GACTTTTTAA TCAAAGAGCA ACCTATACGT
ATACTCAATG CTAAGAAAGA CTGGAATAGA GTTAAGCCAC GTACCAAACA TATCGAAGAA
GAATATATAG GTATGTACCT TAAAACGCTT TTAAATTATG TTGATAGAAG CTCACACATG
CAAGCGCCCC ATAGCAATAA TGCACGAGAT ATCATGCTAT TTTTTATGTT TACTGGTGTG
CGTTTAAACG AAGCGCAGTC TTTAAAGTGG TCTGACATCG ACCTTAAAGC TGGCAGGATA
ATATTCAAAG ATACCAAAAA CGGTTCTGAT TATCATATGC CTACTAGTAA TATTTTACAG
GCCCTACTCG AAGAAAGGTG GAGAATGAGT TCTGGTAAGC AATGGGTGTT TCCAAGTGAC
TTGCAAGCCA GCGATGATCA TATAAAAGAC TTAAGTGGTA GTTATAAGGC CATAGGTAAT
CAAGCAAACC TATATATTAC TCCACATGAT CTGCGTCGTA CTTTTGGAAC GGTAGCCAAT
AGCTTAAATA TCAGCTATCC AGTCCTTAAA CGCTTGCTCA ATCATCGTGA AGCTAAATCA
AGCGATGATG TTACCCTACA GTATGTTCAA GTGTCACAGC GGCAACTAAG AGACGCTTTA
AATTCAATAG AGTCTTTCTA TTGTCAGCAT GCTGGCATGA CACAAGATGA AATAATCATT
AAATTTTACT AA
|
|---|
| Protein sequence | MKVKLTKKLI DSVDYTAKGT EIYMDDVLTG FALRIGRQSK RYTLHKRING KLYRDEVEET
HLITLTEARE KASIMMANIK KGMHVYDGLH ENLEDPKNKT NNVPTLQEAY DYFKSTKTGL
AKGTITTYDR QIIHKLKDWL NISLNDITKS MISDKHKEIS KNSEAQANAT MRALRSVWNY
CRDSFLGDDE DFLIKEQPIR ILNAKKDWNR VKPRTKHIEE EYIGMYLKTL LNYVDRSSHM
QAPHSNNARD IMLFFMFTGV RLNEAQSLKW SDIDLKAGRI IFKDTKNGSD YHMPTSNILQ
ALLEERWRMS SGKQWVFPSD LQASDDHIKD LSGSYKAIGN QANLYITPHD LRRTFGTVAN
SLNISYPVLK RLLNHREAKS SDDVTLQYVQ VSQRQLRDAL NSIESFYCQH AGMTQDEIII
KFY
|
|---|
| |