Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1370 |
Symbol | |
ID | 3515328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1653540 |
End bp | 1654811 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637670057 |
Product | phage integrase |
Protein accession | YP_264652 |
Protein GI | 71065925 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000628694 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTA AACTTACCAA AAAACTTATT GATTCAGTAG ACTATACCGC TAAAGGTACT GAAATCTATA TGGATGATGT ATTAACTGGT TTTGCGCTAC GCATAGGCAG GCAATCAAAG CGCTATACAT TGCATAAGCG CATCAATGGA AAGCTGTATA GAGATGAAGT AGAAGAGACA CATCTAATTA CGCTAACTGA AGCACGTGAA AAAGCCAGCA TAATGATGGC AAACATAAAA AAAGGTATGC ATGTTTACGA TGGTCTTCAC GAGAACTTAG AAGATCCGAA AAATAAGACC AATAATGTGC CAACACTGCA AGAAGCTTAT GACTACTTTA AATCAACGAA GACTGGCTTA GCTAAAGGCA CTATTACCAC TTATGACCGT CAAATAATAC ATAAGCTGAA AGACTGGCTA AATATCTCAC TAAATGATAT TACTAAGTCA ATGATAAGTG ATAAACATAA GGAAATAAGC AAGAATAGCG AAGCTCAGGC TAATGCAACT ATGAGAGCTC TGAGATCAGT TTGGAATTAT TGCCGTGATA GCTTTTTAGG TGATGACGAA GACTTTTTAA TCAAAGAGCA ACCTATACGT ATACTCAATG CTAAGAAAGA CTGGAATAGA GTTAAGCCAC GTACCAAACA TATCGAAGAA GAATATATAG GTATGTACCT TAAAACGCTT TTAAATTATG TTGATAGAAG CTCACACATG CAAGCGCCCC ATAGCAATAA TGCACGAGAT ATCATGCTAT TTTTTATGTT TACTGGTGTG CGTTTAAACG AAGCGCAGTC TTTAAAGTGG TCTGACATCG ACCTTAAAGC TGGCAGGATA ATATTCAAAG ATACCAAAAA CGGTTCTGAT TATCATATGC CTACTAGTAA TATTTTACAG GCCCTACTCG AAGAAAGGTG GAGAATGAGT TCTGGTAAGC AATGGGTGTT TCCAAGTGAC TTGCAAGCCA GCGATGATCA TATAAAAGAC TTAAGTGGTA GTTATAAGGC CATAGGTAAT CAAGCAAACC TATATATTAC TCCACATGAT CTGCGTCGTA CTTTTGGAAC GGTAGCCAAT AGCTTAAATA TCAGCTATCC AGTCCTTAAA CGCTTGCTCA ATCATCGTGA AGCTAAATCA AGCGATGATG TTACCCTACA GTATGTTCAA GTGTCACAGC GGCAACTAAG AGACGCTTTA AATTCAATAG AGTCTTTCTA TTGTCAGCAT GCTGGCATGA CACAAGATGA AATAATCATT AAATTTTACT AA
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Protein sequence | MKVKLTKKLI DSVDYTAKGT EIYMDDVLTG FALRIGRQSK RYTLHKRING KLYRDEVEET HLITLTEARE KASIMMANIK KGMHVYDGLH ENLEDPKNKT NNVPTLQEAY DYFKSTKTGL AKGTITTYDR QIIHKLKDWL NISLNDITKS MISDKHKEIS KNSEAQANAT MRALRSVWNY CRDSFLGDDE DFLIKEQPIR ILNAKKDWNR VKPRTKHIEE EYIGMYLKTL LNYVDRSSHM QAPHSNNARD IMLFFMFTGV RLNEAQSLKW SDIDLKAGRI IFKDTKNGSD YHMPTSNILQ ALLEERWRMS SGKQWVFPSD LQASDDHIKD LSGSYKAIGN QANLYITPHD LRRTFGTVAN SLNISYPVLK RLLNHREAKS SDDVTLQYVQ VSQRQLRDAL NSIESFYCQH AGMTQDEIII KFY
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