Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1361 |
Symbol | cysS |
ID | 3515318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1640108 |
End bp | 1641574 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637670047 |
Product | cysteinyl-tRNA synthetase |
Protein accession | YP_264643 |
Protein GI | 71065916 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0215] Cysteinyl-tRNA synthetase |
TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTATGA CCACACCTCT TGCAGACGCG ATGTCTCAGC TCGTCATCTA CGATTCACTT ACTGGACGCA AGCAATCATT TAAACCGCTT GTTGAGGGCA AAGTTGGCAT GTATGTGTGC GGGATGACGG TTTATGATTA TTGTCATATC GGTCATGCAC GGGTGATGGT TGGCTTTGAT ATGGCAGTAC GTTGGCTTGC GCAGCTAGGC TATGATGTGA ATTACGTACG TAATATCACG GATATCGATG ACAAAATCAT CGCTCGTGCT GCCGAAAATG GTGAAGAGAT TGGTGCATTG ACGCAGCGTT TTATTACTGC TATGCATGAA GATGCGACAG CACTTGGCTG CCAATCACCG AATGCAGAAC CGCGTGCGAC GGATTATATC GATGAAATGC AGCAGATGAT TGAGACGTTG GTCAGCAATG ACTATGCCTA CGCAGGCGAC AATGGCGACG TCTACTATGC AGTCGATAGC TTCGCTGATT ATGGTAAATT ATCTAAGCGT AACCTTGATG ATATGCAGGC AGGCTCACGG GTTGAAGTCG AAAACGACAA GCGTAATCCA TTTGATTTTG TCTTATGGAA GGCAGCGAAA CCTGATGAGC CCCAATGGGT GTCATCTTGG GGTCAAGGAC GTCCAGGTTG GCATATTGAA TGCTCGGCGA TGTCGACCAA ATGCCTTGGT AATACCTTTG ATATCCATGG TGGTGGTCAT GATTTGCAGT TCCCGCATCA TGAAAACGAG ATTGCCCAAT CTGAAGCGGC GACCGGCTGT GAATACGCGC GCAACTGGAT GCATGTTGGC TTCATCAATG TCGATGGTGA AAAAATGTCT AAGTCATTGG GTAACTTTTT CACCATTCGC GATGTGATGG CAAAATACCT GCCAGAAACG GTACGTTTTT TCTTATTGTC GAGTCACTAT CGTAGCCAAG TGAATTTCTC TGATAGTGCA TTGGACGAAG CGCATAATAG CCTAAGCAGA TTATATCAAG CCCTCAAAGT TGTTGAACAG CAAAAAGGTC AAACGCTTAT TGTCGATGAC GCATTGATTA ATAATGCTTA TGCAAGTGCG CCTGGACAAG ACTTTATCAA AGCCATGAAT GATGACTTTA ATAGCTCAAC GGCTATTAGT GTGCTGTTTG GATTGGCGCG TGATATTAAC AAAGCCAGCA AAGTAGAAGA TATAGAGAGT GCATGGCAGT TGGCGCAACA ATTAAAGGCG TTGGCGCAAA CGCTAAATAT TTTGCAGCAG CCTGTACAGC AGTTCTTGCA AGCCGTCATC GGTGAAGCAG CTGAAGACGG TTTAACAGAT GAGGCTATTG ATAGTTTAAT TATTGAGCGC GCTGATGCCA AGACCAATAA AAACTTTGCC CGTGCTGATG AGATACGTAT ACAGTTAAAA GACGCCGGTA TTGAGCTTGA AGACAGTCGT GCTGGCACCA CTTGGCGCCG TGCTTAA
|
Protein sequence | MIMTTPLADA MSQLVIYDSL TGRKQSFKPL VEGKVGMYVC GMTVYDYCHI GHARVMVGFD MAVRWLAQLG YDVNYVRNIT DIDDKIIARA AENGEEIGAL TQRFITAMHE DATALGCQSP NAEPRATDYI DEMQQMIETL VSNDYAYAGD NGDVYYAVDS FADYGKLSKR NLDDMQAGSR VEVENDKRNP FDFVLWKAAK PDEPQWVSSW GQGRPGWHIE CSAMSTKCLG NTFDIHGGGH DLQFPHHENE IAQSEAATGC EYARNWMHVG FINVDGEKMS KSLGNFFTIR DVMAKYLPET VRFFLLSSHY RSQVNFSDSA LDEAHNSLSR LYQALKVVEQ QKGQTLIVDD ALINNAYASA PGQDFIKAMN DDFNSSTAIS VLFGLARDIN KASKVEDIES AWQLAQQLKA LAQTLNILQQ PVQQFLQAVI GEAAEDGLTD EAIDSLIIER ADAKTNKNFA RADEIRIQLK DAGIELEDSR AGTTWRRA
|
| |