| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1322 |
|---|
| Symbol | |
|---|
| ID | 3515279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 1592572 |
|---|
| End bp | 1595427 |
|---|
| Gene Length | 2856 bp |
|---|
| Protein Length | 951 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637670010 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_264606 |
|---|
| Protein GI | 71065879 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1067] Predicted ATP-dependent protease |
|---|
| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAC AGACAAACAC ACTGATGAAT CAAAACCCGA AAAACACCAG CGATATGGTA
ACGCCTGCTA GTGACTTGAG TAGTAAACAT ACCTCTCATA AACTGTTATC TAATAAACTG
TCACCTAATA AACTATTAGA CAGTAAAAAT CTGGCTCGTG AAATGACAGC GAAAGAAAAA
AATAATGACG ACGCTGATGC TACGCCTCAT CCTATATTCA TAGAAGTCAG TCAGCGCTGT
CTTGTCGCGG CAAACCAGCT TAAGCGTTAT AGTAAACCTA GTCTGCTGCC AGCCGATACC
CGCAGCGCAC CAGATTTAGA TATTGGTTTT GGGCAACAGC GAGCGCTTAA GGCATTGCAT
ACCGCCCTCG ATATCCATGC TAGTGGCTAT CATGTGTTTG CAGCAGGCGA AAATGGTTTG
GGTAAACGTA CCGTGATTAG TCGCTTGCTC AGTCTTATCG CAGCCGATGC ACCGACGCCG
GATGATTGGG TATATGTACA CAATTTTACT GATCCACGGA CTCCGTTAGC ACTACGCTTA
CCTGCTGGTC AGGCCGCTGT CTTGCAACAA CAAGTCAATA CTCTATGGCA ACAAGCCAAA
AAACGGCTGA GTCAACGTTT TCGTAGCGAC CAGTATCAAA GCAAAATAGA AGCCATCAAA
AATGACACGC ATCAAAAAGA AAGCCACGCC TATGATGCGC TCAATGCTGA GGGCAAACAG
TATGACTTGG CGTTAACCTT TCGCCCATTT GACAATAAAG CCGTTTTTGT TCATCCAAGC
CAGATCGCGA CAGAAAATAG CGACACTGCT GCTAAAGATA AGAACGTACT AAATCGCGAT
AAGAAAGCGG CTACTGCGAG CATCGATATT CGCAATACTG AAGCTGACAA TAATGCATAC
AGCAGTGAAT ATGAGACTGA GCTGAATAAT TTTGCCCAAA AAAACCATAT GCAAAAGCGG
CTTAGTCAGC TGACCATTGC TTTAGAGCAA TTAGAAGATG AAGCTAACGA TGCAATTGAG
TTGTTACATC GTAATATTTC TAAGCGGGCG CTACAGCCGT TATTCACACC TATTTATGAG
CAGTTCAGCG CTCACCCACT TGTTGTTGAG TATCTAAAGG TAGTCTTTGC CGATATGATT
ACTCATGTCG AGCGTATCGT TAATGGAGAT GATGAAGAGT TTGTAACGGC ATTGCTCGCC
ACGACGCCTA GCCGCTATGC GGTCAATGTT ATTAGCAGCC ATGAGCCTGA TAGTGGTGCG
CCCGTTATCT TTGAAGACCT GCCCACTCAC TTAAATCTAT TGGGTCATGT AGAGCAAATC
ACCCAATTAG GCACAGTCAC TACCAATGTC AGCATGATTC GTGCGGGCGC TTTACATCGT
GCCAATGGTG GCTATCTGCT GCTTGAAGCC AGTCATTTGC TTGAGCACCC TTATGCTTGG
CAGGGTCTTA AGCGTGCACT GCAATCTCGC AAAATCAAAC TATCAAGTCT TGAGCAGATG
CTGACCTTAA CAGGAAGTTT ATCCTTATCG CCTGCGCCGA TTGATCTTGA CATAAAGGTC
ATTTTGTTGG GTGAAGCCGA TTTATATTAT GAATTACTAG AGCTTGAGCC GGAGTTTGAT
GCGGTATTTA AGGTACGTGC TGATTTTCAC GATGATGTAG TGCGCACTCA TGAACACGAG
CTAGCGTTGG TCGGAAAGAT GGCAGACATC ATCGATTATG ACAATCTTTA TCCTTTTGAT
AGGAGGGCAC AGGCAACCCT GCTTGAGCAT CTAAGTCTGC AAGCAGAGGA CCAAGACCGT
CTGAGTCTGC ACAGTGATTT ACTTATTAAG CTGTTGCATG AATCTAACCG CCATGCGCGT
TTGGGCGGAC AGGATATCGT CAGTGCTAAG CATGTGGTAC AAGCTATTGA AGATATGGAT
GAGCGCTCAG GATATTTGCG TGACCTATAT TGGGACGAGC TCAAAAATGG TCAGCAGCTT
ATCCAGACTC AAGGAAAAGC GGTTGGACAA GTCAACGCTT TAACAGTCGT GAGCTATGCC
GATAGTGAAT TTGGCATGCC TGCCCGTCTC ACGGCGGTCA TTCAGCCAAA TATTGGTACT
GGTGAAATTC TAGATATCGA GCGTGATGTT GATTTGGGCG GTAGCTTACA CGCCAAAGGT
ATGTTGATTA TGACCAGCTA CTTACGGGCG TTATTTAGTC AGCACCATGC GCTAAACTTT
AGTGCTTCAT TGGCCTTTGA GCAAAGCTAT GCGCATATTG ATGGTGATAG CGCAACCGTC
AGCGAAGGCT GTGCCCTATT ATCTGCTTTA GCAAACGTAC CCATTAATCA ATCTCTTGCG
ATTACAGGTT CTATGAACCA GCTCGGCGAA GTACAAGCCG TCGGCGGCAT CAATTCCAAG
ATTGCTGGTT TCTTTGATGC GTGCCGCGAG CAAGAATTGA CTGGACAGCA AGGCGTGGTC
ATTCCTATGG CAAACGTTAA ACAGCTTATG CTGCGTGATG ACATTATTAC TGCCGTTAAA
GCAGGTAGCT TTCATATATA TGGGGTGCAC ACGCTCAGTG AAGCGCTCAC ATTGATGACG
GGATTACCTG TCGATACGGT GAATAAGAAA AGTCGATATC GCAAAGAGAC ACTGTTCGGT
AAAGTCTTAA GTCGTTTGAT GCTATGGGAT GACAACCAAA ATGCAGATGA TGACATTGAC
GATAAAAAAT CAAAAAAGAA AGCTAAAAAA AAGCGCCAAG CCAAACGGCA AAAAAAAGAA
GACAAGAAAA AAGCAGCTAA AAAAGACAAG GCTATTACTA TTAAAGAGCA CAATGACATC
ATCGTAGAAG AAATCACTAT AGATGAAGCA CGCTAG
|
|---|
| Protein sequence | MTEQTNTLMN QNPKNTSDMV TPASDLSSKH TSHKLLSNKL SPNKLLDSKN LAREMTAKEK
NNDDADATPH PIFIEVSQRC LVAANQLKRY SKPSLLPADT RSAPDLDIGF GQQRALKALH
TALDIHASGY HVFAAGENGL GKRTVISRLL SLIAADAPTP DDWVYVHNFT DPRTPLALRL
PAGQAAVLQQ QVNTLWQQAK KRLSQRFRSD QYQSKIEAIK NDTHQKESHA YDALNAEGKQ
YDLALTFRPF DNKAVFVHPS QIATENSDTA AKDKNVLNRD KKAATASIDI RNTEADNNAY
SSEYETELNN FAQKNHMQKR LSQLTIALEQ LEDEANDAIE LLHRNISKRA LQPLFTPIYE
QFSAHPLVVE YLKVVFADMI THVERIVNGD DEEFVTALLA TTPSRYAVNV ISSHEPDSGA
PVIFEDLPTH LNLLGHVEQI TQLGTVTTNV SMIRAGALHR ANGGYLLLEA SHLLEHPYAW
QGLKRALQSR KIKLSSLEQM LTLTGSLSLS PAPIDLDIKV ILLGEADLYY ELLELEPEFD
AVFKVRADFH DDVVRTHEHE LALVGKMADI IDYDNLYPFD RRAQATLLEH LSLQAEDQDR
LSLHSDLLIK LLHESNRHAR LGGQDIVSAK HVVQAIEDMD ERSGYLRDLY WDELKNGQQL
IQTQGKAVGQ VNALTVVSYA DSEFGMPARL TAVIQPNIGT GEILDIERDV DLGGSLHAKG
MLIMTSYLRA LFSQHHALNF SASLAFEQSY AHIDGDSATV SEGCALLSAL ANVPINQSLA
ITGSMNQLGE VQAVGGINSK IAGFFDACRE QELTGQQGVV IPMANVKQLM LRDDIITAVK
AGSFHIYGVH TLSEALTLMT GLPVDTVNKK SRYRKETLFG KVLSRLMLWD DNQNADDDID
DKKSKKKAKK KRQAKRQKKE DKKKAAKKDK AITIKEHNDI IVEEITIDEA R
|
|---|
| |