Gene Psyc_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1317 
Symbol 
ID3515274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1587960 
End bp1588391 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content42% 
IMG OID637670005 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_264601 
Protein GI71065874 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.893415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTA GAAAACCGAC CGTTGAGCCG CTTGAAATTA ATCTGACTCC GATGATTGAT 
TGTTTATTGT TTTTAATCGT GTTTTTGCTA TTGGCAACCT CTTTCAATCA CTTTAGCCGC
TTAAACATTA TTTTGCCTGA AGCTGAAGGT GTGGCGCTGA CTGAAGATAA AAACAGTATC
GAGGTAGCTG TGCAAGAAGA TGGAAGCTAC TTGGTCAATG GTATCACTCT TGCCAGTAGT
AATGAGGCGG AACTCACCAG TATATTGCAG CAAGAAGCAG GCAGTAATCG TGATATGCTT
TTTGTGATTG CTGCCGATGC CAATGCCACA CATCAATCAG TGGTGCGAGT GATGGATATC
GCTGGCAAAT TGGGCTTTTT AAATATAAAC ATCAGTACGG TTGTACCACT TGGTCAAGCA
TTACCACAAT AA
 
Protein sequence
MRFRKPTVEP LEINLTPMID CLLFLIVFLL LATSFNHFSR LNIILPEAEG VALTEDKNSI 
EVAVQEDGSY LVNGITLASS NEAELTSILQ QEAGSNRDML FVIAADANAT HQSVVRVMDI
AGKLGFLNIN ISTVVPLGQA LPQ