| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1301 |
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| Symbol | |
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| ID | 3515258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1566327 |
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| End bp | 1568375 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637669989 |
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| Product | BCCT family betaine/choline/carnitine/glycine transporter |
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| Protein accession | YP_264585 |
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| Protein GI | 71065858 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACA AATCCTCCCG TTCCACTATT TTATTACCGG TATTTGTGCC GGCAGCAGTC
ATTATGCTGC TATTAGTGAT TGGTACAGCC ATTAATCCGG AGTCTGCTGG CGAGTTGTTT
AGCACCGTTC TAAGTTTTAC CACCGAGACT TTCGGTTGGT TCTATATGTT AGCAGTGGCC
ATATTTTTGA TGTTCATCAT TGTCTTGGCG TTCTCTTCTT ATGGCAGTAT CAAACTGGGT
CCAGATCATG CGGAGGCAGA GTATAATTTT CTTGAATGGT TTGCCATGCT GTTTTCTGCA
GGGTATGGCA TCGCTTTACT ATTCTATGGC GTAGCAGAGC CAGTTATACA CTTTGCCAGT
CCGCCGCTCT CAACACCGCA GACTATTGAG GCCGCCAAAG AAGCAATGCA AATTGCCTAT
TTTCACTGGG GCTTTCATAT TTGGGCGATT TATGGCGTGG TCGGTTTGTC ACTGGCATAT
TTCTCTTTTC GTCATGGCTT GCCCTTGTCA ATGCGCTCAA CACTATACCC ATTAATTGGT
GATAAAATTT ATGGTCCGAT TGGACATACC GTTGATGTAT TTGCCATTGT GGGCACGATG
TTCGGTATCG CGACCAGTTT GGGGATTGCT GTATCGCAAA TCAACGCAGG CGTAAATTAT
CTATTTCCAA ATACGGTACC GGTCAGCATG ACGGTTCAGG TTATTATTAT TGCGCTGGTG
ACACTAGCAG CTTTGATATC TGTCCTCGCT GGCATGGACA AAGGCGTAAA GCGACTATCG
ATTTTGAACA TGGTGTTAGC AACGGGACTG ATGCTGTTTG TCTTTATTGT GGGTCCAACC
ATATTTATTC TCAACGCCTT TATGGAAAAT ACAGGCAGCT ATTTAGGTAA TATCGTTGAG
CGTACTTTTA GCTTGCAAGC CTATCAATCG AGTGATTGGA TCGGTAGTTG GACGCTCTTT
ATCTTTGCAT GGACGATTGC TTGGGCGCCC TTTGTCGGAT TGTTTATTGC TAAGATTAGT
CGGGGGCGTA CTATCCGTGA ATTCGTATTG GGCGTAATGT TGGTACCAAC ATTCTTTACG
TTCTTTTGGT TCGCAGTTTT TGGCGATACA GCGCTGCATA TGATTATGGT TGATGGCTAC
GATGCGCTTA TCACTGAAGT ACAAAATAAC CAAGCGATTG CATTGTTTAA ATTATTAGAG
AACTTGCCTT TCTCTCAGAT AGTGTCGTCA TTGACAGTAT TATTGATTAT CACTTTTTTT
GTGACCTCAT CAGATTCAGG GTCGTTGGTT ATTGACTCCC TTGCAGCGGG TGGACGTAGT
GATACGCCAT GGTGGCAACG TACTTTTTGG GTAGTGACTG AAGGCGCAGT TGCCGCTGTT
CTGTTGGTAG CTGGTGGATT AACAGCGTTA CAGACCGCAG CTATTGTCAG CGCCTTACCC
TTTGCTGTTA TTATATTGAT TTCAATATTT GGGATGTGGC GTGCGCTACG TATTGAAGGT
CATCGTAACC AGAGTCTAGG TAACGATAAT AGAATCCCGC CGCATCTGCT TAAGCCATCC
GCATGGCGTG AGCGCATTGA TTATATGACG GATAAGCCGA CTCGCGATAA AGTTTTAAGC
TATATCCAAG AGACTATTAT GCCGTCTATG GTAGAAGTCT CAGAGAAGTT TGCAGAAACT
GGCTGGACGA CTGAAGTCAA TTATGATGCG ATTAATAATC GCGCGGTATT GGAGTTACAA
CGAGGCAGTG ATGTCGAGTT CTGGTATGAG GTACGCTTAT CTGAGCATGA TACGCCAGAT
TATTACACTG AAGATAACGC TGATAAATTA CCGCAACAGC ATGATCATCG CGCTGAAGTA
TATCTGCGCC GTGGTGGTCA GACCTACGAC TTATATGGTT ATGAGTCCGA GTCAGTCATC
AATGACATTA TTGATCAATT CGAGAAATAT CTACACTTTG TGAACGTCTC GCCAGATATT
CTACCGTGGC GTATGCAAGA GCATGATGAA GATATTACAC TGGAGCAGGG CAGTGTATTT
GATAAATAA
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| Protein sequence | MKNKSSRSTI LLPVFVPAAV IMLLLVIGTA INPESAGELF STVLSFTTET FGWFYMLAVA
IFLMFIIVLA FSSYGSIKLG PDHAEAEYNF LEWFAMLFSA GYGIALLFYG VAEPVIHFAS
PPLSTPQTIE AAKEAMQIAY FHWGFHIWAI YGVVGLSLAY FSFRHGLPLS MRSTLYPLIG
DKIYGPIGHT VDVFAIVGTM FGIATSLGIA VSQINAGVNY LFPNTVPVSM TVQVIIIALV
TLAALISVLA GMDKGVKRLS ILNMVLATGL MLFVFIVGPT IFILNAFMEN TGSYLGNIVE
RTFSLQAYQS SDWIGSWTLF IFAWTIAWAP FVGLFIAKIS RGRTIREFVL GVMLVPTFFT
FFWFAVFGDT ALHMIMVDGY DALITEVQNN QAIALFKLLE NLPFSQIVSS LTVLLIITFF
VTSSDSGSLV IDSLAAGGRS DTPWWQRTFW VVTEGAVAAV LLVAGGLTAL QTAAIVSALP
FAVIILISIF GMWRALRIEG HRNQSLGNDN RIPPHLLKPS AWRERIDYMT DKPTRDKVLS
YIQETIMPSM VEVSEKFAET GWTTEVNYDA INNRAVLELQ RGSDVEFWYE VRLSEHDTPD
YYTEDNADKL PQQHDHRAEV YLRRGGQTYD LYGYESESVI NDIIDQFEKY LHFVNVSPDI
LPWRMQEHDE DITLEQGSVF DK
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