Gene Psyc_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1288 
Symbol 
ID3515245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1551499 
End bp1552620 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content43% 
IMG OID637669976 
ProductAFG1-like ATPase protein 
Protein accessionYP_264572 
Protein GI71065845 
COG category[R] General function prediction only 
COG ID[COG1485] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.444038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGTC GTATTATGAG TTTATCTCCC TTACAGCGTT ATGAGCAAGC CATCAGCACG 
GATGAGTTTA CTCGAGATGA GCAGCAGTAT TTGGCCATGA GTTACTTGGA TGGTCTTTAC
CATCAGCTCA ATGATAGCGC GGTACAAAAA AAAGGCTTTT TTAGTTTTTT AAAAGCAAAG
CCTGTTGCAC CCAAAGGTTT GTATATGTGG GGCGGGGTAG GACGTGGTAA AACATGGATG
ATGGACATGT TTTATGATTC ATTGACCATT GAGCGCAAGA TGCGTCAACA TTTTCATCAT
TTTATGCAGC GGGTACATCA AGAGTTACAT AAGCTGCAAG GTGAGAGCGA TCCGTTAGAA
AAAGTCGCTG ATATCATTTA TGCCGAAGCG GTGATTATCT GTTTTGATGA GTTTTTTGTC
TCCAACGTCT CTGATGCCAT GATTTTAGGT GATTTGTTCA CTATGCTATT CAATCGTGGC
ATTACGTTGG TGGCGACGTC AAATATTGAG CCATCAGGAC TCTATAAAGA TGGCTTGCAT
CGTGATCGCT TTATGCCTGC TATTGCCGAA GTTGAGAATC ATACCAGCGT TATGAATATT
GACTCTGGTA TTGATTATCG CTTGCGTGTA TTGCAACAAG CAGAGCTATA CGAGTCGCCC
ATGACCAAAG CCAATCATCA CTGGCTCGCC AACCGTTTTG CCAGCTTGTC TAATAATCAA
AAATTTAGCA ATGAGCCTAT TACTGTAAAT GGTCGTGAAA TCAGAATTAA TGCGCGCACC
GATGACATCT TATTCTGCGA TTTCCGTCAT TTATGTATGG AGCCGCGTTC GGCATCTGAT
TTTATCGAAA TTGCCAAGCA GTTTAGCACC GTACTCATCA ATGCAGTGCC AGCGCTAGAT
GATGATTTAC GTGACCCAAC ACGACGCTTT ATTTACTTGG TCGATGAGTT TTATGATCGC
CGCGTCAAAT TATTGGTGCG CGCGCAGCAG CCGATTCTTG AGCTATATCA AGGAGAGAAA
TTGGCGTTTG AGATAGAGCG TACACGTTCG CGCCTGCTTG AGATGCAGTC AGAAGATTAT
CTAAAAATGG CGCATCGTAC AGAAAATTTG GATGCTGCAT AG
 
Protein sequence
MMSRIMSLSP LQRYEQAIST DEFTRDEQQY LAMSYLDGLY HQLNDSAVQK KGFFSFLKAK 
PVAPKGLYMW GGVGRGKTWM MDMFYDSLTI ERKMRQHFHH FMQRVHQELH KLQGESDPLE
KVADIIYAEA VIICFDEFFV SNVSDAMILG DLFTMLFNRG ITLVATSNIE PSGLYKDGLH
RDRFMPAIAE VENHTSVMNI DSGIDYRLRV LQQAELYESP MTKANHHWLA NRFASLSNNQ
KFSNEPITVN GREIRINART DDILFCDFRH LCMEPRSASD FIEIAKQFST VLINAVPALD
DDLRDPTRRF IYLVDEFYDR RVKLLVRAQQ PILELYQGEK LAFEIERTRS RLLEMQSEDY
LKMAHRTENL DAA