Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1280 |
Symbol | |
ID | 3515237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1543571 |
End bp | 1544302 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637669968 |
Product | branched chain amino acid efflux pump, LivE family, large subunit |
Protein accession | YP_264564 |
Protein GI | 71065837 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.228947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACACTC AATCAAATGA GATCAATCAA ACTCAAATAC AAGGCTATGA CTGGGCAGAA GGCTTTAAAA AAAGCTTACC AGTTGCCATG GGTTATTTGC CAGCGGGTAT CGCCTTTGGT GTGCTTGCCC AAGTTGCTGG TATACCAATA TGGGCAACGA TTATGCTCAG CGTGGTGTTA TATGCAGGCG CGGCGCAATA TGCCTGCCTA CCGATGCTGA GTGCCGGATT ACCGATTGGT AGTATTGCTA CCAACATTGC AGCGATTAAT TTGCGTCATG TCTTTTATGG CATGCCGTTA TTACAATATC TACCACAAAA CAAAATAGCC AAAACCTATT GTTTATTTGC CCTCACCGAT GAGACTTTTT CGGTGATGAC CAGTTTACCG AACGAATCAC GGCAATCGTT GATATTACCG GTCAGCATAT TTAATCAAGG CTGGTGGGTG CTAGCGAGTG CCATTGGCGT TTTGATTGGC AGCGCCCTGA GTGACTTAGT GCCACATTTA GATTTTGCCT TGGTATGTTT ATTCGCGATT TTGGCGTATG AACAATTTCA AAGCATCAAA CGTTATTTCC CTATTGTTAT TGCTGTCATT GCGTTGGCTA TCGCTTCACT ATTTACCAGT CATTGGTTAC TACTGGTGGC AATTACTATT TGTATGATGA TGATTTTGGC TCGTGGGTTT TTTACACCAT ATAGCGTAAA AGGAGACAAT AATGATCAGT AG
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Protein sequence | MNTQSNEINQ TQIQGYDWAE GFKKSLPVAM GYLPAGIAFG VLAQVAGIPI WATIMLSVVL YAGAAQYACL PMLSAGLPIG SIATNIAAIN LRHVFYGMPL LQYLPQNKIA KTYCLFALTD ETFSVMTSLP NESRQSLILP VSIFNQGWWV LASAIGVLIG SALSDLVPHL DFALVCLFAI LAYEQFQSIK RYFPIVIAVI ALAIASLFTS HWLLLVAITI CMMMILARGF FTPYSVKGDN NDQ
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