| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1249 |
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| Symbol | |
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| ID | 3515206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1497926 |
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| End bp | 1501168 |
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| Gene Length | 3243 bp |
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| Protein Length | 1080 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637669937 |
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| Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_264533 |
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| Protein GI | 71065806 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.907532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCAG TAGAGCAATT TACCCCGCAA GAGCCGATTT TATTTAATCC TATCGACTTG
TTGTCACCAG AATATATTGC TCAGTCATCA ACAGAGCTGC ATACGCGTAT ATCGCCTTTG
TATAGCGTGG ATGAAGAGCG CTGGTTGACG CAATTGTTGC CACTTGCCAA ACCGACAGAT
GCCGAGCGTG ACAGTGCAGC TACGCAGACG CGTCAGCTGG TTGAGCATGT GCGTAATGAT
GGTAAAGCGG TAAAAATGGT CGACTCATTA TTGCTTGAGT ACAGCTTGGA TACCCAAGAA
GGTGTTTTGC TCATGAGCTT GGCAGAAGCC TTGATTCGTG TGCCAGACAA TTATACGGCT
GATGCGCTGA TTCATGACAA GATGAGCGTC GCTGACTGGA AAAAACATTT AAAAAATGAC
AATGGTTTTA TGGTCAATGC CTCAACGTGG GGCATGATGA TGACAGGTCG CGTGGTCAGT
ATCGATAGTG ATACCACGGC ATCTGGCTTT TTGGATCGTA TGACCAAAAA GATGGGCGAG
CCTGTTATTC GAAGTGCCAT GCAAAAAGCC ATGCGTATCA TGGGGCATCA GTTTGTACTC
GGCGAAACCA TCGAAGGCGC CAATAAAAAC AGCCAACCAT ATCGCAATAA GGGCTATACC
TACTCATTTG ATATGCTGGG TGAAGCGGCA ATTACCCATA AAGATGCTGA AAAATACTTT
AACGATTATC TGCACGCGAT CAAAGCCACG GCAAGTGTGA AAGTTAAAGA GGGCATGCCG
AAGCCGTCAG TCTCTATCAA GCTGTCTGCC TTGCATTCGC GTTATGAAGC AACCCAAGAA
GCACAAGTCA TGGGACTGTT GCGTCAACGC TGCTTACTAT TGATTGAAGC CGCTCGTGAG
GTCAATGTCG ACATCAGTAT CGATGCCGAA GAAGCTGATC GTCTTGAGAT ATCTCTAAAA
TTATTTGAGT CTTTGTACCG TGATAATCTG ACAGCAGATT GGGATGGTCT TGGCTTAGTC
GTGCAAGGTT ACTCTAAACG CGCGATCGCT ATTTTGGCTT GGCTGGCGCG CTTGGCAATT
GAGGTTGGCG ACCGTATTCC TGTACGTCTA GTAAAAGGCG CCTATTGGGA CACAGAAATT
AAATTGGCTC AGCAAAAAGG TCTATCAGGC TATGCGGTCT GGACGCGTAA AGAAGGCACG
GATACCGCTT ATCTTGCCTG CGCGCGTTTC TTGTTGTCAG AGCATTTGCG CGGTCTGATT
TGGCCACAGT TTGCCACTCA CAATGCGCAT ACGCTTGCTT CAATCATGAC CATGAGCTCG
CATAGAGACT TTGAGTTCCA GCGTCTGCAT GGTATGGGAG ATGCGCTTTA TGATCATATT
TTGCAAGCCT ATCAAATCCC TGTACGTATC TATGCACCGG TTGGCGCTCA TAAAGATCTA
CTACCGTATT TGGTACGTCG TCTGCTTGAA AACGGTGCCA ATAGCTCGTT TGTGCACCAG
TTATTAGACA AGTCTTATCC AATTGACAAG CTAACTGTAC ATCCATATGA CAAGCTATTA
ACCAATGCTA CGCTACACAA TCCAGATATT CCATTGCCAT TAGCTATTTA TGGCGCGCGC
CGTGCCAGCT TTGGTCCCAA TATCTTTATA GGGTCGCAGT GGATACCGTT TAAAGCGGCT
ATCGACACGC ATATACACAA AACATGGTCA GCGACTTCTG TCATTAATGG CAAAGCAATC
AATGACTATG ATGCAGATGG CAAGATTCAT CAGCTTGATA GTCAGGCAGT ACGTGCGCCT
TGGAACCATG AAGTCATCGT CGGTGAAGTC GTTTATGCCA ACGCTACTAT CGCACAGCAA
GCAATTGCGG CGGCAGTCGC TGGACAAGGC GAGTGGCAAG CTGTTTCCGC TGCTAAGCGT
GCAGCGATAC TGCGTAAAAT GGCTGATTTG TATGAAGAAA ACTATGCAGA GCTGATGGCA
TTATGCCAAG TTGAAGCCGG TAAAACCTTA CAAGATAGCA TTGATGAAAT CAAAGAAGCG
GTTGATTTTT GCCGTTTTTA TGCTGATGAA GCAGAGCGTC TAGATGATGT GGTTTATGAG
TTTATTGATT TGGCAGGCAA GCCGTCGCGT CAAGTTTATA AAGCACGTGG CACCTTTATT
TGTATCAGTC CTTGGAACTT TCCATTGGCT ATCTATACCG GTCAAGTGGT CGCTGCGCTG
GCTGCAGGTA ATACCGTGGT GGCAAAACCT GCTGAGCAAA CCAGCCTGAT TGCACATTTT
GCCGCGCAGC TTATGTATCA AGCCGGCGTG CCAGTAGCAG CGTTGCAACT CGTGATTGGT
GCTGGCGATG TTGGTGCTGC ATTGACCGCA GCTGATAATA TCGCTGGTGT TATCTTTACA
GGCTCGACCC AAACCGCTCA GCGTATCAAC CAAAGCCTAA ACGCCCATGC CCAAGTCAGC
GGTGAGCTGC CTGTCTTTAT CGCGGAGACC GGTGGACAGA ATGCTATGAT TATGGACTCA
ACGGCATTGC CTGAGCAAGT GGTCAGAGAT GCGGTATTAT CTGCCTTTGG CTCAGCAGGT
CAGCGCTGTT CAGCATGCCG TATATTGTGT GTACAAGAAG AGATGGCAGA TGATGTGATT
GAGCTGCTAC AGGGCAATAT GGCTGAATTA ATCGTTGGCA ATCCGCTATA TGCGACCACA
GATGTGGGTC CTGTGATTGA TATCGATGCC AAGCGTGGAC TTGAAGCGCA TATCGAGCGT
ATGCGCGCTG AGCCAACTGC CACTATTTTG GCGCAGACAC CGATGAGTGC TAGCTCAGAG
GTCAGTCAAG ATCAAGCAAC GTTTGTATTG CCAACGGCGA TAGAAGTAAA AAGTATCGAC
GTGATCGGTG GGGAGCATTT CGGTCCTATT TTGCATGTGC TGCGTTATGA AGCACGTGAT
TTAAATAAGC TGATTGATGC GATTAATGCG ACAGGTTTTG GCTTGACCTT GGGCATCCAT
AGCCGTATCG AAAACACGGT GGAGCATATT GAGCGCCGTG CGTTTGTCGG CAATACTTAC
ATCAACCGTA ATCAAATCGG TGCGGTCGTA AATGTGCAGC CGTTCGGCGG CTGCGGTCTA
TCAGGCACTG GTCCTAAAGC AGGTGGTCCG CACTATGTCG CCCGTTTAAT GACATTAACG
ACTGAGCAGT TAGCTCTTAA AAACAATACG ACTGAAAACA TTACTCAAAC AACAATCGCA
TAA
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| Protein sequence | MNPVEQFTPQ EPILFNPIDL LSPEYIAQSS TELHTRISPL YSVDEERWLT QLLPLAKPTD
AERDSAATQT RQLVEHVRND GKAVKMVDSL LLEYSLDTQE GVLLMSLAEA LIRVPDNYTA
DALIHDKMSV ADWKKHLKND NGFMVNASTW GMMMTGRVVS IDSDTTASGF LDRMTKKMGE
PVIRSAMQKA MRIMGHQFVL GETIEGANKN SQPYRNKGYT YSFDMLGEAA ITHKDAEKYF
NDYLHAIKAT ASVKVKEGMP KPSVSIKLSA LHSRYEATQE AQVMGLLRQR CLLLIEAARE
VNVDISIDAE EADRLEISLK LFESLYRDNL TADWDGLGLV VQGYSKRAIA ILAWLARLAI
EVGDRIPVRL VKGAYWDTEI KLAQQKGLSG YAVWTRKEGT DTAYLACARF LLSEHLRGLI
WPQFATHNAH TLASIMTMSS HRDFEFQRLH GMGDALYDHI LQAYQIPVRI YAPVGAHKDL
LPYLVRRLLE NGANSSFVHQ LLDKSYPIDK LTVHPYDKLL TNATLHNPDI PLPLAIYGAR
RASFGPNIFI GSQWIPFKAA IDTHIHKTWS ATSVINGKAI NDYDADGKIH QLDSQAVRAP
WNHEVIVGEV VYANATIAQQ AIAAAVAGQG EWQAVSAAKR AAILRKMADL YEENYAELMA
LCQVEAGKTL QDSIDEIKEA VDFCRFYADE AERLDDVVYE FIDLAGKPSR QVYKARGTFI
CISPWNFPLA IYTGQVVAAL AAGNTVVAKP AEQTSLIAHF AAQLMYQAGV PVAALQLVIG
AGDVGAALTA ADNIAGVIFT GSTQTAQRIN QSLNAHAQVS GELPVFIAET GGQNAMIMDS
TALPEQVVRD AVLSAFGSAG QRCSACRILC VQEEMADDVI ELLQGNMAEL IVGNPLYATT
DVGPVIDIDA KRGLEAHIER MRAEPTATIL AQTPMSASSE VSQDQATFVL PTAIEVKSID
VIGGEHFGPI LHVLRYEARD LNKLIDAINA TGFGLTLGIH SRIENTVEHI ERRAFVGNTY
INRNQIGAVV NVQPFGGCGL SGTGPKAGGP HYVARLMTLT TEQLALKNNT TENITQTTIA
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