Gene Psyc_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1247 
Symbol 
ID3515204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1495781 
End bp1496953 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content44% 
IMG OID637669935 
Producthypothetical protein 
Protein accessionYP_264531 
Protein GI71065804 
COG category[S] Function unknown 
COG ID[COG2850] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000169648 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTA TACCGCTTTG TTTACCAGCT TCCATCACAC CTGAACAATT TTTAAATGAT 
TATTGGCAAA AAAAACCGCT ACTGATTAAG CAAGGTTTAC CACAATTAAT TGGCATGTTT
GAGCCAGAAG ATATGCTTGG TCTAGCCATA GAAGAAGATG CCACAGCGCG CCTGCTGACC
CAAGCTGCCA GCAAGCAAGA GGGTCAAGCG CAATGGCACC TTAAAAAAAG CCCGCTAACT
GAAGTGGATT TTGATAACTT GCCTGAGCAA TGGTCGGTAT TGGTGCAGAA TCTTGAACAA
TGGTCGCCGG AACTTGGCGC GTTATGGCAG GCGCTTGATT TTATCCCGCA GTGGCAGCGC
GATGATATTA TGGTCTCTTA TGCACCAAAA GGCGGCTCGG TTGGCAAGCA TTATGATGAT
TATGATGTAT TTTTAGCGCA AGGTTATGGC TCTAGACGTT GGCAGTTGGG TAAGTTCTGT
GATGAACAAA CAGCGTTTGT CGCCGATGAG CCGATACGAC TATTTGATGA TATGGGTGAG
ATTATCTTTG ATGAGATACT AGAAGCCGGT GATGTGCTGT ATGTACCACC AAAATTAGCG
CATTTTGGCG TGGCACAAGA TGATTGCCTG ACCTTCTCAT TTGGCTGTCG TCGTCCAAAC
TTGATGCAAA TTATTGACAG CCTTGCCGAT GTGGCAACCA ATAACAGTGA TTTATTTATA
CCCATGTTAT TGCCACAAGC CATGCAAGCA TCAGGTGAGT TAAAGGCAGA CAGTATCGAA
GCGATCAAAA ATCAATTGTT GCAAATGCTA CAGTCTGAGC ACGGTGACGC GATTATTCGC
CAAGCAGTGT CAGAGGTAGT CAGCAAGCGT CAATATGATG CACTCGTACC GGAAGAAATG
CTCAATACTG ATGAGATGAT ATCTGCATTG GCAAATGGCG CGACGCTACA AGCCGATTAT
AGCAATCGTT TGTTATATAC CAAAACCTAT AATAGCATTG TTGTATATGT TAATGGGCAG
CGCTTAGACA ATATTGATGA GACGGCAACC AAGCTATTGG TACGCTTAGC AGATGGCGCA
CAATTGACGC TTGATAATAT GGAAGGGATT GATCCTGACG AGGTGATGGA ATGGCTAGAA
AATGGCTGGG TGTGGCTGAA TTATCCTGAA TAA
 
Protein sequence
MTSIPLCLPA SITPEQFLND YWQKKPLLIK QGLPQLIGMF EPEDMLGLAI EEDATARLLT 
QAASKQEGQA QWHLKKSPLT EVDFDNLPEQ WSVLVQNLEQ WSPELGALWQ ALDFIPQWQR
DDIMVSYAPK GGSVGKHYDD YDVFLAQGYG SRRWQLGKFC DEQTAFVADE PIRLFDDMGE
IIFDEILEAG DVLYVPPKLA HFGVAQDDCL TFSFGCRRPN LMQIIDSLAD VATNNSDLFI
PMLLPQAMQA SGELKADSIE AIKNQLLQML QSEHGDAIIR QAVSEVVSKR QYDALVPEEM
LNTDEMISAL ANGATLQADY SNRLLYTKTY NSIVVYVNGQ RLDNIDETAT KLLVRLADGA
QLTLDNMEGI DPDEVMEWLE NGWVWLNYPE