| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1238 |
|---|
| Symbol | |
|---|
| ID | 3515195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 1485977 |
|---|
| End bp | 1486996 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637669926 |
|---|
| Product | putative luciferase |
|---|
| Protein accession | YP_264522 |
|---|
| Protein GI | 71065795 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.816802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.894284 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACC CTATTCCCTT ATCTTTCTTA GATTTAGCCC CTGTTCCTGA GGGTAAAACT
ATTGCTGAAG GCATTGCCCA AACGGTTGAA ACCGCGCAGC AAGCTGAAAA ATCTGGCTTA
AACCGTTACT GGATGGCAGA GCATCATAAT ATGCCCGGTA TCGCTAGTGC AGCGACGTCG
GTACTACTGT CGCATATTGG TGCTCAGACC AAGCGTATAC GTATTGGCGC AGGCGGCGTC
ATGCTGCCCA ATCATGCACC GCTTGTTATC GCAGAGCAGT TTGGTACTTT GCAAGCATTA
TATGGCGACC GCATAGATTT GGGGTTGGGT CGTGCGCCCG GTACAGATGG TGCAACTTTT
CAAGCATTAC GTCGTCAGAT GCAAGATGCC GATCGCTTTC CACAAGATGT GCAAGAGTTG
ATGTACTTTT TGGGGAATGG CACAGATGAT AGCCCAGTAC AGGCATTTCC GGGTGCAAAA
TCTAACATTC CTATTTGGAT ATTAGGTTCG TCTCTTTTTG GTGCGACCTT AGCAGCGCAC
TTAGGATTGC CATATGTGTT TGCCTCGCAC TTTGCACCGC AAATGCTTGG ACAAGCCATT
ACAGCTTATC GTGAGCAATT TAGACCATCG GCCTATTTAG ATAAGCCTTA TGTCATGCTA
GCGGCAAATT TATTGCTTGC TGATGATGAT GCGACGGCGC AGTATCACTT TACTTCAGCC
CAGCAGAGTT TTGTGCGTTT ACGCCGTGGT GAAACAGGTC AAATGCCAAA GCCTACTCAT
GATATGGATA GTATCTGGAA CGCTGCTGAG AAAATGATGG TGGATAGTGC GTTGTCGGTA
TCCTTTATCG GCTCTGTTGA AACCGTCAAA CCAAAGCTTG CGACGTTTCT TGCTACCTAT
CAGCCAGATG AGCTGATTGT GACAGCAAAC GTTTATGACC AAGCAGCACG TATGCGCTCG
CTTGAGCTTG TCTCTGAGCT TAATTTGTTT GATTTACAAC CAACAGCAAC GCTTGCATAA
|
|---|
| Protein sequence | MSNPIPLSFL DLAPVPEGKT IAEGIAQTVE TAQQAEKSGL NRYWMAEHHN MPGIASAATS
VLLSHIGAQT KRIRIGAGGV MLPNHAPLVI AEQFGTLQAL YGDRIDLGLG RAPGTDGATF
QALRRQMQDA DRFPQDVQEL MYFLGNGTDD SPVQAFPGAK SNIPIWILGS SLFGATLAAH
LGLPYVFASH FAPQMLGQAI TAYREQFRPS AYLDKPYVML AANLLLADDD ATAQYHFTSA
QQSFVRLRRG ETGQMPKPTH DMDSIWNAAE KMMVDSALSV SFIGSVETVK PKLATFLATY
QPDELIVTAN VYDQAARMRS LELVSELNLF DLQPTATLA
|
|---|
| |