Gene Psyc_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1234 
Symbol 
ID3515191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1478906 
End bp1479823 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content42% 
IMG OID637669922 
ProductHemK family modification methylase 
Protein accessionYP_264518 
Protein GI71065791 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGC AAAAAGCAGC AGACGTAACA GTATGGCAAA TCAAACAGCA AGCGGAAAAA 
GCGGCTACAG ATGCCGCTAT TCCGCAGTTT TGGATAACTG ATTGGCTGTT ATATGTCATT
GATAAACCCG CGCTATTTTT AATAACTGAT GATAACTATC AGCTAAGTGA TAGTGAGACT
GAGCGATTTA ATGCTGGTAT GACTAAGATG CAGCAAGGTA CACCATTGGC TTATTTAACG
GGCACACAGG CGTTTTGGTC GCTTGATTTT ACCGTTAATG AACATACCTT GATTCCCAGA
CCCGATACTG AAGTTTTGGT TGAAACAGTG TTAGATTGGA TAAAAAGTCA ACCATTTAGT
ACAACGCCAA CGTTAAAGTC AATGCGATTG CTAGATTTGG GAACCGGTTC TGGTTGTATT
GCCATTAGCC TGGCTCACGA GTTAAAGCTG GCTGATACGT TAAAACAAGT AAGCTGGCAA
GTCGTTGCTG TTGATTTCTC GCTAGAGGCG CTAAAAATTG CGCAGCATAA TGCTGTCAGT
AATGCTGTTG AAGTGACGTT TGTCCATAGT AGCTGGTATG ACGAATTGCC TACTCAAGAT
GAGCAGTTAT TTGATGTGAT TGTCTCTAAC CCGCCTTACA TTGATGAAGC GGATGAGCAT
TTAGCAGGTT TGTTAGCAGA GCCTATCAGT GCTTTGAGTG CCCCAAATCA TGGCTTGGCT
GATATTGAAC ATATTGTCTA TTATGCACCA CAATATCTAA AAGTAGGCGG GCTGCTAGCG
ATTGAGCATG GTTATGATCA AGGGCAGGCT GTGCGCCAAT TATTTGCGGA CAATCACTTC
GATAATATAC GAACGATTAA AGATTTTGGC GGAAACGATA GAATGACGCT TGGGCAGTTT
AATAAACATT CGCTTTAA
 
Protein sequence
MTAQKAADVT VWQIKQQAEK AATDAAIPQF WITDWLLYVI DKPALFLITD DNYQLSDSET 
ERFNAGMTKM QQGTPLAYLT GTQAFWSLDF TVNEHTLIPR PDTEVLVETV LDWIKSQPFS
TTPTLKSMRL LDLGTGSGCI AISLAHELKL ADTLKQVSWQ VVAVDFSLEA LKIAQHNAVS
NAVEVTFVHS SWYDELPTQD EQLFDVIVSN PPYIDEADEH LAGLLAEPIS ALSAPNHGLA
DIEHIVYYAP QYLKVGGLLA IEHGYDQGQA VRQLFADNHF DNIRTIKDFG GNDRMTLGQF
NKHSL